Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   MKX80_RS06130 Genome accession   NZ_CP150260
Coordinates   1218639..1222331 (+) Length   1230 a.a.
NCBI ID   WP_268323926.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1213639..1227331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS06120 (MKX80_06120) modB 1214387..1215043 (+) 657 WP_154994075.1 molybdate ABC transporter permease subunit -
  MKX80_RS06125 (MKX80_06125) addB 1215152..1218652 (+) 3501 WP_268323927.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  MKX80_RS06130 (MKX80_06130) addA 1218639..1222331 (+) 3693 WP_268323926.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  MKX80_RS06135 (MKX80_06135) sbcD 1222397..1223578 (+) 1182 WP_154994080.1 exonuclease subunit SbcD -
  MKX80_RS06140 (MKX80_06140) sbcC 1223575..1226967 (+) 3393 WP_268342777.1 exonuclease subunit SbcC -
  MKX80_RS06145 (MKX80_06145) - 1227012..1227230 (-) 219 WP_016885923.1 spore germination protein -

Sequence


Protein


Download         Length: 1230 a.a.        Molecular weight: 141173.02 Da        Isoelectric Point: 5.4682

>NTDB_id=968437 MKX80_RS06130 WP_268323926.1 1218639..1222331(+) (addA) [Bacillus sp. FSL K6-0972]
MEISKPKGSTWTDDQWKAIVSSGRDILVAAAAGSGKTAVLVERIIRKITDQEYPVDVDRLLVVTFTNASAAEMKHRIGEA
LEKELAENPGSLHLRRQLALLNKASISTLHSFCLQVIRKYYYMIDVDPAFRIADQTEGELLGDEVLDELFEEEYKKQDPA
FFELVDRYTTDRHDLDLQHLVKRVYEFSRSHPDPEGWLHTFVDLYDAASDTKVEALPFYSYIKEDIALVLEGMRQKLTRA
LDLTKQPGGPAPRAENFLDDLAQIDRLIQQQNDFSALHELVPAVSFQRLKPCKGDEYDPRLVDEAADLRNSAKKQLEKLK
SDYFTRTPEQHLESLREMKPVIQTLVQLVLEYGKRFAEAKKEKAIVDFSDLEHDCLAILSGKNQAGEAVPSEAAKFYRHQ
FHEVLVDEYQDTNLVQEAILKLVAKEEHEGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTDDGSGSGQKIDLNKNFRSR
SDILDSTNFLFKQLMGEKVGEVEYDEQAELKLGASYPPNEATKTELLLIENQSGVPDEEAEELEAVQLEARAMAGQIRRL
ITEKFQVYDAKAKASRNIQYRDIVVLLRSMPWAPQIMDEFKQQGIPVYANLSTGYFEATEVSVTLSLLKIIDNAYQDIPL
ASVLRSPVVGLDENELSLIRIKDKKAPFYEAVKAYLVAADGDERLSEKLRRFDGLLKKWRAFAKNHSVAELIWEIYRDTK
YLDYVGGMPGGKQRQANLRALYDRARSYESTSFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLEFP
VVFTAGLGRNFNMMDLNKSYLLDKELGFGTKFIHPKWRISYPTLPLIAMKKKLRRELLSEELRVLYVALTRAKEKLYLVG
TAKDKEKLLADWRSQAAGSEWLLPDYERFQAKSYLDFIGPALMRHRDMDESGAPPVIDEIRKHPARFQVSWLSAADLKAE
DVDRAGEERHGRLAQIQMGLPIDGSFEYEQQVRERLTWSYPYNDAAKVRTKQSVSEMKRQKEYEDEYGDRSLIRPSQEAF
LFKRPSFMMAKGLTAAERGTAMHTVMQHIPLTRTPEMNELSSLLDRLVEKELLTEDQRAAIGEDDILAFFDTEIGQKLLG
ARRVEREVPFNMTLSAKEVYPDLESADEPVLIQGIIDCLFETEDGFYLLDYKTDRIHGKYRNGFEGAEPILRKRYETQIQ
LYARAVETMIKMPLKGRALYFFDGGHVLLF

Nucleotide


Download         Length: 3693 bp        

>NTDB_id=968437 MKX80_RS06130 WP_268323926.1 1218639..1222331(+) (addA) [Bacillus sp. FSL K6-0972]
ATGGAGATTTCTAAACCGAAGGGCAGCACTTGGACTGATGACCAATGGAAGGCGATCGTCTCATCCGGCCGGGACATTTT
AGTCGCGGCAGCGGCCGGTTCCGGAAAAACGGCCGTGCTGGTTGAACGGATCATTCGGAAAATAACGGATCAGGAATACC
CAGTAGATGTCGACAGGCTGCTCGTCGTCACCTTTACGAATGCATCTGCGGCTGAAATGAAGCACAGGATCGGCGAAGCG
CTCGAAAAAGAGCTTGCCGAAAATCCGGGATCGCTTCATTTGCGCAGACAGCTTGCTTTATTAAATAAAGCGAGCATATC
AACATTGCACTCATTCTGTCTTCAAGTCATCCGCAAATACTATTATATGATCGATGTTGATCCGGCTTTCCGGATCGCCG
ATCAGACGGAAGGCGAGCTGCTAGGCGATGAGGTGCTGGATGAACTGTTTGAAGAAGAATACAAAAAGCAAGATCCGGCC
TTTTTCGAACTTGTGGACAGATATACGACAGACCGTCATGACCTCGATTTGCAGCATCTTGTCAAGCGGGTCTACGAGTT
TTCCCGCTCGCATCCCGATCCTGAGGGCTGGCTTCACACATTTGTTGATCTGTATGACGCTGCTTCAGATACAAAAGTTG
AGGCTCTGCCGTTTTATTCTTACATTAAAGAAGACATCGCACTCGTTCTGGAAGGTATGCGGCAAAAGCTGACGCGTGCG
CTTGATTTGACAAAACAGCCCGGGGGGCCTGCTCCGCGCGCCGAAAATTTCCTCGATGATTTAGCGCAGATTGACAGGCT
GATTCAGCAGCAGAATGATTTTTCAGCCCTGCATGAGCTTGTGCCTGCTGTTTCGTTTCAAAGATTGAAGCCATGCAAAG
GAGATGAGTACGATCCTCGATTGGTTGATGAGGCGGCAGACCTTCGCAACAGTGCGAAAAAGCAGCTTGAAAAGCTGAAA
AGCGATTATTTTACGCGAACTCCCGAGCAACACCTTGAGAGTCTGAGGGAAATGAAGCCGGTCATTCAGACACTCGTCCA
GCTCGTACTGGAGTACGGCAAGCGGTTTGCGGAAGCGAAAAAGGAAAAAGCGATCGTCGATTTCTCAGACCTCGAACACG
ACTGCCTTGCGATTTTATCCGGGAAAAACCAAGCGGGCGAGGCCGTGCCGAGCGAAGCGGCGAAGTTTTACCGCCATCAG
TTCCACGAAGTGCTTGTCGATGAATATCAAGATACGAACCTGGTCCAGGAAGCGATTTTAAAGCTCGTCGCCAAAGAGGA
GCATGAGGGGAACTTGTTTATGGTGGGCGATGTTAAGCAGTCGATTTACCGGTTCCGCCTCGCTGAGCCGCTTTTGTTCC
TCTCGAAATATAAACGCTTTACAGACGATGGCTCGGGTTCCGGCCAAAAAATCGATTTAAATAAAAACTTCAGAAGCCGT
TCAGATATTTTGGACAGCACGAACTTTTTATTCAAGCAGCTCATGGGAGAAAAGGTCGGGGAAGTCGAATATGACGAACA
AGCCGAATTGAAGCTCGGCGCGTCTTATCCGCCGAACGAAGCGACAAAAACGGAGCTTCTGCTCATCGAAAACCAGAGCG
GCGTGCCGGATGAAGAGGCTGAAGAGCTTGAGGCGGTCCAGCTTGAAGCAAGAGCGATGGCCGGGCAAATCCGCAGGCTG
ATTACAGAAAAATTTCAAGTATATGATGCCAAAGCGAAAGCGTCGCGGAACATCCAGTACCGTGATATTGTCGTGCTTTT
ACGGTCGATGCCTTGGGCGCCTCAAATTATGGACGAGTTTAAACAGCAGGGGATTCCCGTATACGCGAACCTCTCAACGG
GTTATTTTGAAGCGACAGAAGTATCAGTCACACTGTCTTTATTAAAAATCATCGATAATGCCTATCAGGACATCCCGCTT
GCATCCGTTCTCAGATCGCCTGTTGTGGGTCTTGACGAAAATGAGCTTTCCTTGATCAGAATCAAGGATAAAAAAGCGCC
GTTTTACGAAGCGGTGAAAGCATACCTTGTTGCAGCAGACGGCGACGAGAGGCTTAGCGAAAAGCTTCGCCGCTTTGACG
GCCTGCTCAAAAAGTGGAGAGCGTTTGCGAAAAACCACTCTGTGGCAGAGCTGATCTGGGAAATCTACCGGGATACGAAG
TATTTGGATTATGTCGGCGGAATGCCGGGCGGAAAACAGCGGCAGGCCAATTTACGCGCGCTTTACGACAGGGCGAGATC
CTATGAATCGACATCATTCCGCGGCTTGTTCCGCTTTTTAAGATTTATTGAGCGGATGCAGGAGCGGGGCGATGACCTCG
GTACGGCAAGAGCTCTGAGCGAACAGGAAGACGTTGTTCGGCTGATGACGATCCACTCAAGCAAAGGGCTTGAATTTCCT
GTCGTATTTACCGCCGGTCTCGGACGGAATTTTAATATGATGGACTTGAACAAATCTTATCTGCTGGATAAAGAGCTCGG
TTTCGGAACGAAGTTTATCCATCCGAAGTGGCGGATCAGCTATCCGACGCTGCCGCTGATCGCGATGAAGAAAAAGCTCC
GCCGCGAGCTTTTATCAGAGGAGCTGCGCGTCTTGTATGTCGCCCTTACCCGGGCTAAGGAAAAGCTGTACCTGGTCGGG
ACGGCGAAGGATAAAGAAAAGCTGCTTGCCGACTGGCGGTCACAAGCGGCCGGGTCTGAGTGGCTGCTCCCGGATTATGA
ACGGTTTCAGGCGAAATCATACCTGGATTTCATCGGACCTGCTTTGATGAGACACAGAGATATGGATGAATCCGGAGCGC
CGCCGGTGATTGATGAGATCCGTAAACATCCTGCGCGCTTTCAGGTCAGCTGGCTGTCCGCCGCGGATCTGAAAGCTGAG
GATGTTGATCGGGCCGGTGAAGAAAGACACGGCCGGCTCGCCCAAATTCAAATGGGGCTTCCGATCGACGGTTCGTTTGA
GTATGAGCAACAAGTCAGAGAACGGCTGACATGGTCATATCCATACAATGACGCCGCCAAAGTCCGAACAAAACAGTCTG
TCTCAGAAATGAAAAGACAGAAGGAATATGAGGATGAATACGGCGACCGTTCGCTGATCCGCCCATCCCAGGAGGCTTTC
CTGTTTAAACGGCCGTCCTTTATGATGGCAAAAGGCCTGACTGCGGCCGAACGGGGAACGGCGATGCACACCGTCATGCA
GCATATTCCGCTGACCCGTACGCCTGAAATGAATGAGCTCAGCAGTCTCCTTGACAGACTTGTTGAGAAAGAGCTGTTAA
CAGAAGACCAGCGGGCAGCTATTGGCGAAGACGATATTCTCGCATTCTTTGATACGGAAATCGGACAAAAGCTTCTCGGC
GCCCGCCGCGTCGAACGGGAAGTTCCGTTTAACATGACGCTGTCCGCCAAAGAGGTTTATCCGGATCTCGAGTCAGCCGA
TGAACCTGTATTGATACAGGGAATTATTGACTGTTTATTCGAGACGGAGGACGGTTTTTACCTTCTTGATTACAAAACCG
ACCGGATACACGGAAAATACCGGAACGGCTTTGAAGGAGCGGAACCGATTTTAAGAAAACGTTACGAAACACAGATTCAG
CTTTATGCACGAGCGGTTGAAACGATGATTAAAATGCCGCTCAAAGGGCGTGCGCTGTACTTTTTTGACGGAGGACACGT
GCTCTTATTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

72.114

100

0.721


Multiple sequence alignment