Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   MKY32_RS05695 Genome accession   NZ_CP150259
Coordinates   1133394..1133972 (+) Length   192 a.a.
NCBI ID   WP_339244051.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0998     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1128394..1138972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY32_RS05675 (MKY32_05675) - 1128896..1130188 (-) 1293 WP_339244050.1 globin-coupled sensor protein -
  MKY32_RS05680 (MKY32_05680) - 1130295..1131824 (-) 1530 WP_003180351.1 FAD-dependent oxidoreductase -
  MKY32_RS05685 (MKY32_05685) - 1131965..1132822 (+) 858 WP_003180352.1 SDR family oxidoreductase -
  MKY32_RS05690 (MKY32_05690) - 1132888..1133121 (-) 234 WP_003180353.1 IDEAL domain-containing protein -
  MKY32_RS05695 (MKY32_05695) comK 1133394..1133972 (+) 579 WP_339244051.1 competence protein ComK Regulator
  MKY32_RS05700 (MKY32_05700) - 1133966..1134331 (-) 366 WP_003180357.1 hypothetical protein -
  MKY32_RS05705 (MKY32_05705) - 1134540..1135151 (+) 612 WP_003180359.1 TVP38/TMEM64 family protein -
  MKY32_RS05710 (MKY32_05710) lepB 1135164..1135682 (+) 519 WP_145645330.1 signal peptidase I -
  MKY32_RS05715 (MKY32_05715) - 1135811..1137586 (-) 1776 WP_119953699.1 S8 family peptidase -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22448.65 Da        Isoelectric Point: 8.6298

>NTDB_id=968361 MKY32_RS05695 WP_339244051.1 1133394..1133972(+) (comK) [Bacillus sp. FSL K6-0998]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSITSFENQVYRTAWLRTKFIDRIEGN
AMQKRQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=968361 MKY32_RS05695 WP_339244051.1 1133394..1133972(+) (comK) [Bacillus sp. FSL K6-0998]
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGGAGAAAAGCGGGCACATATGAGGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAATATTTTTCTTTTTCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCACATCTTTTGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACCGGATTGAAGGAAAC
GCCATGCAGAAGAGACAGGAATTTATGCTCTATCCGAAGGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
ACTGAAAAAGCGCTATTGA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(9-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

69.149

97.917

0.677

Multiple sequence alignment