Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MKY56_RS19505 Genome accession   NZ_CP150257
Coordinates   3735956..3736075 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus sp. FSL M8-0054     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3730956..3741075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY56_RS19480 (MKY56_19480) albG 3731119..3731820 (+) 702 WP_339249053.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MKY56_RS19485 (MKY56_19485) - 3731826..3733202 (-) 1377 WP_046381401.1 YncE family protein -
  MKY56_RS19490 (MKY56_19490) - 3733242..3734597 (-) 1356 WP_046381402.1 YncE family protein -
  MKY56_RS19495 (MKY56_19495) - 3734594..3734824 (-) 231 Protein_3781 hypothetical protein -
  MKY56_RS19500 (MKY56_19500) rapF 3734827..3735972 (+) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  MKY56_RS19505 (MKY56_19505) phrF 3735956..3736075 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  MKY56_RS19510 (MKY56_19510) - 3736189..3736639 (+) 451 Protein_3784 YbaK/EbsC family protein -
  MKY56_RS19515 (MKY56_19515) speB 3736671..3737543 (-) 873 WP_003227545.1 agmatinase -
  MKY56_RS19520 (MKY56_19520) speE 3737604..3738434 (-) 831 WP_003227543.1 spermidine synthase -
  MKY56_RS19525 (MKY56_19525) - 3738636..3740711 (+) 2076 WP_029726084.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=968264 MKY56_RS19505 WP_041334633.1 3735956..3736075(+) (phrF) [Bacillus sp. FSL M8-0054]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=968264 MKY56_RS19505 WP_041334633.1 3735956..3736075(+) (phrF) [Bacillus sp. FSL M8-0054]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment