Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MKY56_RS01995 Genome accession   NZ_CP150257
Coordinates   370419..370817 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0054     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 365419..375817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY56_RS01960 (MKY56_01960) - 366287..366482 (+) 196 Protein_342 hypothetical protein -
  MKY56_RS01965 (MKY56_01965) - 366522..366836 (+) 315 Protein_343 RDD family protein -
  MKY56_RS01970 (MKY56_01970) - 366918..367250 (+) 333 WP_015252849.1 YckD family protein -
  MKY56_RS01975 (MKY56_01975) - 367378..367800 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  MKY56_RS01980 (MKY56_01980) - 367788..368129 (+) 342 WP_032724911.1 DUF3147 family protein -
  MKY56_RS01985 (MKY56_01985) - 368148..368876 (+) 729 WP_046380777.1 AAA family ATPase -
  MKY56_RS01990 (MKY56_01990) bglC 368949..370382 (+) 1434 WP_134982418.1 6-phospho-beta-glucosidase -
  MKY56_RS01995 (MKY56_01995) nin/comJ 370419..370817 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  MKY56_RS02000 (MKY56_02000) nucA/comI 370844..371293 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  MKY56_RS02005 (MKY56_02005) tlpC 371461..373182 (-) 1722 WP_048654750.1 methyl-accepting chemotaxis protein TlpC -
  MKY56_RS02010 (MKY56_02010) hxlB 373293..373850 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  MKY56_RS02015 (MKY56_02015) hxlA 373856..374488 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  MKY56_RS02020 (MKY56_02020) hxlR 374720..375082 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=968195 MKY56_RS01995 WP_015252845.1 370419..370817(-) (nin/comJ) [Bacillus sp. FSL M8-0054]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=968195 MKY56_RS01995 WP_015252845.1 370419..370817(-) (nin/comJ) [Bacillus sp. FSL M8-0054]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATACGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment