Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFA   Type   Machinery gene
Locus tag   MKX71_RS18220 Genome accession   NZ_CP150256
Coordinates   3518436..3519827 (-) Length   463 a.a.
NCBI ID   WP_339231460.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0071     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3513436..3524827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS18185 (MKX71_18185) flgL 3513607..3514503 (-) 897 WP_015714797.1 flagellar hook-associated protein FlgL -
  MKX71_RS18190 (MKX71_18190) flgK 3514514..3516037 (-) 1524 WP_003228001.1 flagellar hook-associated protein FlgK -
  MKX71_RS18195 (MKX71_18195) flgN 3516056..3516538 (-) 483 WP_339231458.1 flagellar protein FlgN -
  MKX71_RS18200 (MKX71_18200) flgM 3516554..3516820 (-) 267 WP_014478128.1 flagellar biosynthesis anti-sigma factor FlgM -
  MKX71_RS18205 (MKX71_18205) - 3516901..3517320 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MKX71_RS18210 (MKX71_18210) comFC 3517394..3518116 (-) 723 WP_029725992.1 comF operon protein ComFC Machinery gene
  MKX71_RS18215 (MKX71_18215) comFB 3518080..3518376 (-) 297 WP_339231459.1 late competence protein ComFB -
  MKX71_RS18220 (MKX71_18220) comFA 3518436..3519827 (-) 1392 WP_339231460.1 ATP-dependent helicase ComFA Machinery gene
  MKX71_RS18225 (MKX71_18225) - 3519934..3520779 (-) 846 WP_128738295.1 DegV family protein -
  MKX71_RS18230 (MKX71_18230) degU 3520877..3521566 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MKX71_RS18235 (MKX71_18235) degS 3521649..3522806 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  MKX71_RS18240 (MKX71_18240) - 3523023..3523676 (+) 654 WP_003227979.1 YigZ family protein -

Sequence

Protein


Download         Length: 463 a.a.        Molecular weight: 52656.70 Da        Isoelectric Point: 9.8572

>NTDB_id=968178 MKX71_RS18220 WP_339231460.1 3518436..3519827(-) (comFA) [Bacillus sp. FSL M8-0071]
MNVPVEKNSSFSKELQQTLRSRHLLRTELSFSDEMIEWHIKNGYITAENSISINKRRYRCNRCGQTDQRYFSFYHSSGKN
KLYCRSCVMMGRVSEEVPLYSWEEENEPNWQSIKLTWDGKLSSGQQKAANVLIEAISKKEELLIWAVCGAGKTEMLFPGI
ESALNQGLRVCIATPRTDVVLELVPRLKAAFQGADISALYGGSDDKGRLSPLMISTTHQLLRYKDAIDVMIIDEVDAFPY
PADQTLQFAVQKARKKNSTLVYLSATPPKELKRKALNGQLHSVRIPARHHRKPLPEPRFVWCGNWKKKLNRNKIPPAVKR
WIEFHIKEGRPVFLFVPSVSILEKAAACFRGVHCRTASVHAEDKHRKEKVQQFRDGQLDLLITTTILERGVTVPKVQTGV
LGAESSIFTESALVQIAGRTGRHKEYADGDVIYFHFGKTKSMLDARKHIKEMNELAAKVECTD

Nucleotide


Download         Length: 1392 bp        

>NTDB_id=968178 MKX71_RS18220 WP_339231460.1 3518436..3519827(-) (comFA) [Bacillus sp. FSL M8-0071]
GTGAATGTGCCAGTTGAAAAAAACAGTTCCTTTTCAAAAGAATTGCAGCAGACGCTTCGAAGCCGTCATTTGCTCAGGAC
TGAGCTCTCATTTTCCGATGAGATGATTGAATGGCATATCAAGAATGGATATATCACTGCTGAAAATTCTATATCCATAA
ATAAACGGAGATATAGATGTAATAGGTGCGGACAAACTGATCAGCGGTATTTTTCTTTTTATCACTCATCTGGAAAGAAT
AAGCTGTATTGCCGTTCCTGTGTCATGATGGGCAGAGTGAGTGAGGAGGTTCCTTTATATTCATGGGAAGAGGAAAATGA
ACCAAACTGGCAGTCAATTAAACTGACATGGGACGGCAAGCTTTCAAGCGGACAACAAAAAGCCGCCAATGTTTTAATTG
AAGCAATATCAAAAAAAGAAGAGCTCCTCATCTGGGCGGTTTGCGGCGCTGGCAAAACAGAAATGCTGTTTCCTGGTATA
GAATCAGCGTTAAATCAAGGACTGCGTGTATGTATTGCAACACCTCGCACCGATGTTGTATTAGAGCTTGTTCCAAGGCT
CAAGGCTGCCTTTCAGGGTGCTGACATTTCAGCGCTTTACGGAGGAAGCGATGACAAAGGGCGGCTATCGCCGCTTATGA
TTTCCACTACGCATCAGCTTTTGCGATATAAAGATGCAATCGATGTTATGATCATTGATGAAGTTGACGCTTTTCCATAT
CCTGCTGATCAAACCCTTCAATTCGCTGTTCAAAAAGCAAGAAAGAAAAACAGCACCCTCGTTTATTTAAGTGCAACACC
TCCTAAAGAATTAAAAAGAAAAGCACTGAACGGACAGTTACATTCAGTTCGCATCCCCGCAAGACACCACCGGAAACCTT
TACCCGAACCGCGCTTTGTATGGTGTGGAAACTGGAAGAAGAAATTAAACCGAAATAAAATTCCGCCAGCGGTGAAAAGA
TGGATAGAGTTTCATATAAAAGAAGGGAGGCCTGTTTTTTTATTCGTTCCTTCCGTTTCTATTCTGGAAAAGGCTGCTGC
GTGCTTTAGAGGTGTTCATTGCCGAACCGCATCTGTGCACGCGGAAGACAAGCATAGAAAGGAGAAAGTGCAGCAATTCA
GAGATGGTCAGCTCGATTTATTAATCACAACAACAATACTGGAAAGAGGCGTCACAGTCCCCAAGGTGCAAACGGGTGTA
CTAGGAGCGGAATCGTCTATCTTTACGGAAAGCGCACTTGTTCAAATTGCAGGAAGAACCGGCCGGCATAAAGAATATGC
GGACGGCGATGTCATTTACTTTCACTTCGGCAAAACAAAGAGTATGCTCGATGCAAGAAAGCATATAAAAGAAATGAATG
AATTGGCAGCAAAAGTTGAATGTACAGACTAG

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(327-423)

Type III restriction enzyme, res subunit (ResIII)

(120-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFA Bacillus subtilis subsp. subtilis str. 168

98.488

100

0.985

Multiple sequence alignment