Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MKZ05_RS14535 Genome accession   NZ_CP150255
Coordinates   2858480..2859121 (-) Length   213 a.a.
NCBI ID   WP_003213500.1    Uniprot ID   A0AB34QVB6
Organism   Bacillus sp. FSL M8-0277     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2853480..2864121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ05_RS14500 (MKZ05_14500) - 2854613..2855044 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  MKZ05_RS14505 (MKZ05_14505) - 2855044..2855385 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  MKZ05_RS14510 (MKZ05_14510) - 2855378..2856856 (+) 1479 WP_309215906.1 Na+/H+ antiporter subunit D -
  MKZ05_RS14515 (MKZ05_14515) - 2856863..2857342 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  MKZ05_RS14520 (MKZ05_14520) - 2857342..2857623 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  MKZ05_RS14525 (MKZ05_14525) mnhG 2857607..2857981 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MKZ05_RS14530 (MKZ05_14530) - 2858067..2858456 (-) 390 WP_106066313.1 hotdog fold thioesterase -
  MKZ05_RS14535 (MKZ05_14535) comA 2858480..2859121 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  MKZ05_RS14540 (MKZ05_14540) comP 2859202..2861514 (-) 2313 WP_212045488.1 ATP-binding protein Regulator
  MKZ05_RS14545 (MKZ05_14545) comX 2861569..2861739 (-) 171 WP_212045489.1 competence pheromone ComX -
  MKZ05_RS14550 (MKZ05_14550) - 2861736..2862650 (-) 915 WP_212045490.1 polyprenyl synthetase family protein -
  MKZ05_RS14555 (MKZ05_14555) degQ 2862802..2862942 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MKZ05_RS14560 (MKZ05_14560) - 2863448..2863801 (+) 354 WP_212045491.1 inner spore coat protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24155.54 Da        Isoelectric Point: 4.5204

>NTDB_id=968095 MKZ05_RS14535 WP_003213500.1 2858480..2859121(-) (comA) [Bacillus sp. FSL M8-0277]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQETDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=968095 MKZ05_RS14535 WP_003213500.1 2858480..2859121(-) (comA) [Bacillus sp. FSL M8-0277]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATCATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGGAGACCGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTCAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCGATTGAATACAG
CTTGACGTCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTTTTAATTGCAAAATCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.028

100

0.714

Multiple sequence alignment