Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MKY10_RS20100 Genome accession   NZ_CP150253
Coordinates   3836319..3836438 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL P4-0290     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3831319..3841438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS20080 (MKY10_20080) albG 3831483..3832184 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MKY10_RS20085 (MKY10_20085) - 3832190..3833566 (-) 1377 WP_015250987.1 YncE family protein -
  MKY10_RS20090 (MKY10_20090) - 3833605..3834960 (-) 1356 WP_015250986.1 YncE family protein -
  MKY10_RS20095 (MKY10_20095) rapF 3835190..3836335 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  MKY10_RS20100 (MKY10_20100) phrF 3836319..3836438 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  MKY10_RS20105 (MKY10_20105) - 3836536..3836998 (+) 463 Protein_3902 YbaK/EbsC family protein -
  MKY10_RS20110 (MKY10_20110) speB 3837030..3837902 (-) 873 WP_015250983.1 agmatinase -
  MKY10_RS20115 (MKY10_20115) speE 3837963..3838793 (-) 831 WP_003227543.1 spermidine synthase -
  MKY10_RS20120 (MKY10_20120) - 3838995..3841070 (+) 2076 WP_048654792.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=967995 MKY10_RS20100 WP_009968329.1 3836319..3836438(+) (phrF) [Bacillus sp. FSL P4-0290]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=967995 MKY10_RS20100 WP_009968329.1 3836319..3836438(+) (phrF) [Bacillus sp. FSL P4-0290]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment