Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGA   Type   Machinery gene
Locus tag   MKY10_RS09375 Genome accession   NZ_CP150253
Coordinates   1756987..1758057 (+) Length   356 a.a.
NCBI ID   WP_004399124.1    Uniprot ID   A0A809FNW6
Organism   Bacillus sp. FSL P4-0290     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1751987..1763057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS09340 (MKY10_09340) - 1752181..1752426 (-) 246 WP_003226300.1 DUF2626 domain-containing protein -
  MKY10_RS09345 (MKY10_09345) mgsR 1752658..1753038 (+) 381 WP_339226414.1 transcriptional regulator MgsR -
  MKY10_RS09355 (MKY10_09355) rsbRD 1753262..1754098 (+) 837 WP_015714260.1 RsbT co-antagonist protein RsbRD -
  MKY10_RS09360 (MKY10_09360) - 1754151..1755479 (-) 1329 WP_003230150.1 hemolysin family protein -
  MKY10_RS09365 (MKY10_09365) corA 1755622..1756575 (+) 954 WP_015483432.1 magnesium transporter CorA -
  MKY10_RS09370 (MKY10_09370) - 1756577..1756774 (+) 198 WP_014480259.1 CBS domain-containing protein -
  MKY10_RS09375 (MKY10_09375) comGA 1756987..1758057 (+) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  MKY10_RS09380 (MKY10_09380) comGB 1758044..1759081 (+) 1038 WP_044052501.1 comG operon protein ComGB Machinery gene
  MKY10_RS09385 (MKY10_09385) comGC 1759095..1759391 (+) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MKY10_RS09390 (MKY10_09390) comGD 1759381..1759812 (+) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  MKY10_RS09395 (MKY10_09395) comGE 1759796..1760143 (+) 348 WP_021480020.1 ComG operon protein 5 Machinery gene
  MKY10_RS09400 (MKY10_09400) comGF 1760169..1760552 (+) 384 WP_015251713.1 ComG operon protein ComGF Machinery gene
  MKY10_RS09405 (MKY10_09405) comGG 1760553..1760927 (+) 375 WP_015251714.1 ComG operon protein ComGG Machinery gene
  MKY10_RS09410 (MKY10_09410) - 1760998..1761177 (+) 180 WP_029726723.1 YqzE family protein -
  MKY10_RS09415 (MKY10_09415) - 1761219..1761545 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  MKY10_RS09420 (MKY10_09420) tapA 1761817..1762578 (+) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 40458.64 Da        Isoelectric Point: 9.0175

>NTDB_id=967959 MKY10_RS09375 WP_004399124.1 1756987..1758057(+) (comGA) [Bacillus sp. FSL P4-0290]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=967959 MKY10_RS09375 WP_004399124.1 1756987..1758057(+) (comGA) [Bacillus sp. FSL P4-0290]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGTTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A809FNW6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment