Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   MKY10_RS01970 Genome accession   NZ_CP150253
Coordinates   369323..369721 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus sp. FSL P4-0290     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 364323..374721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS01940 (MKY10_01940) - 364899..365579 (-) 681 WP_024572176.1 amino acid ABC transporter permease -
  MKY10_RS01945 (MKY10_01945) - 365589..366452 (-) 864 WP_029317191.1 transporter substrate-binding domain-containing protein -
  MKY10_RS01950 (MKY10_01950) - 366613..366810 (+) 198 WP_128992271.1 hypothetical protein -
  MKY10_RS01955 (MKY10_01955) - 366830..367285 (+) 456 WP_048654748.1 RDD family protein -
  MKY10_RS01960 (MKY10_01960) - 367367..367699 (+) 333 WP_015252849.1 YckD family protein -
  MKY10_RS01965 (MKY10_01965) bglC 367853..369286 (+) 1434 WP_048654749.1 6-phospho-beta-glucosidase -
  MKY10_RS01970 (MKY10_01970) nin/comJ 369323..369721 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  MKY10_RS01975 (MKY10_01975) nucA/comI 369748..370197 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  MKY10_RS01980 (MKY10_01980) tlpC 370365..372078 (-) 1714 Protein_346 methyl-accepting chemotaxis protein TlpC -
  MKY10_RS01985 (MKY10_01985) hxlB 372189..372746 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  MKY10_RS01990 (MKY10_01990) hxlA 372752..373384 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  MKY10_RS01995 (MKY10_01995) hxlR 373613..373975 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=967926 MKY10_RS01970 WP_015715226.1 369323..369721(-) (nin/comJ) [Bacillus sp. FSL P4-0290]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=967926 MKY10_RS01970 WP_015715226.1 369323..369721(-) (nin/comJ) [Bacillus sp. FSL P4-0290]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment