Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NYE20_RS06155 Genome accession   NZ_CP150252
Coordinates   1183863..1184054 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. FSL R5-0416     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178863..1189054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE20_RS06125 (NYE20_06125) argF 1179727..1180686 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  NYE20_RS06130 (NYE20_06130) - 1180772..1180951 (+) 180 WP_003245356.1 YjzC family protein -
  NYE20_RS06135 (NYE20_06135) - 1180997..1181182 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NYE20_RS06140 (NYE20_06140) - 1181431..1182165 (+) 735 WP_032721340.1 hypothetical protein -
  NYE20_RS06145 (NYE20_06145) - 1182247..1182804 (+) 558 WP_029317608.1 hypothetical protein -
  NYE20_RS06150 (NYE20_06150) med 1182895..1183848 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NYE20_RS06155 (NYE20_06155) comZ 1183863..1184054 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NYE20_RS06160 (NYE20_06160) yjzB 1184084..1184311 (-) 228 WP_120027973.1 spore coat protein YjzB -
  NYE20_RS06165 (NYE20_06165) fabH 1184476..1185414 (+) 939 WP_160244044.1 beta-ketoacyl-ACP synthase III -
  NYE20_RS06170 (NYE20_06170) fabF 1185437..1186678 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NYE20_RS06175 (NYE20_06175) - 1186754..1187539 (+) 786 WP_032725393.1 DUF2268 domain-containing protein -
  NYE20_RS06180 (NYE20_06180) appD 1187731..1188717 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=967862 NYE20_RS06155 WP_003224559.1 1183863..1184054(+) (comZ) [Bacillus sp. FSL R5-0416]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=967862 NYE20_RS06155 WP_003224559.1 1183863..1184054(+) (comZ) [Bacillus sp. FSL R5-0416]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment