Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE20_RS02170 Genome accession   NZ_CP150252
Coordinates   425915..426865 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus sp. FSL R5-0416     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 420915..431865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE20_RS02145 (NYE20_02145) rapC 422375..423523 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  NYE20_RS02150 (NYE20_02150) phrC 423507..423629 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NYE20_RS02155 (NYE20_02155) - 423729..423818 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NYE20_RS02160 (NYE20_02160) - 423900..424013 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  NYE20_RS02165 (NYE20_02165) - 424166..425530 (-) 1365 WP_021481755.1 aspartate kinase -
  NYE20_RS02170 (NYE20_02170) ceuB 425915..426865 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NYE20_RS02175 (NYE20_02175) yclO 426858..427805 (+) 948 WP_125121454.1 petrobactin ABC transporter permease YclO -
  NYE20_RS02180 (NYE20_02180) yclP 427799..428557 (+) 759 WP_161621347.1 petrobactin ABC transporter ATP-binding protein YclP -
  NYE20_RS02185 (NYE20_02185) yclQ 428579..429532 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NYE20_RS02190 (NYE20_02190) - 429579..430997 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=967851 NYE20_RS02170 WP_014475804.1 425915..426865(+) (ceuB) [Bacillus sp. FSL R5-0416]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=967851 NYE20_RS02170 WP_014475804.1 425915..426865(+) (ceuB) [Bacillus sp. FSL R5-0416]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment