Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NYE53_RS18930 Genome accession   NZ_CP150251
Coordinates   3697337..3697456 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL R5-0523     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3692337..3702456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE53_RS18905 (NYE53_18905) albG 3692501..3693202 (+) 702 WP_077670954.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NYE53_RS18910 (NYE53_18910) - 3693208..3694584 (-) 1377 WP_339246185.1 YncE family protein -
  NYE53_RS18915 (NYE53_18915) - 3694623..3695978 (-) 1356 WP_339246187.1 YncE family protein -
  NYE53_RS18920 (NYE53_18920) - 3695975..3696205 (-) 231 WP_339246190.1 hypothetical protein -
  NYE53_RS18925 (NYE53_18925) rapF 3696208..3697353 (+) 1146 WP_339246192.1 response regulator aspartate phosphatase RapF Regulator
  NYE53_RS18930 (NYE53_18930) phrF 3697337..3697456 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NYE53_RS18935 (NYE53_18935) - 3697709..3698188 (+) 480 WP_339246195.1 hypothetical protein -
  NYE53_RS18940 (NYE53_18940) - 3698338..3699126 (+) 789 WP_015714893.1 membrane protein -
  NYE53_RS18945 (NYE53_18945) - 3699113..3699787 (+) 675 WP_339246198.1 hypothetical protein -
  NYE53_RS18950 (NYE53_18950) - 3699797..3700594 (+) 798 WP_231573542.1 hypothetical protein -
  NYE53_RS18955 (NYE53_18955) - 3700597..3701244 (+) 648 WP_339246200.1 ABC transporter ATP-binding protein -
  NYE53_RS18960 (NYE53_18960) - 3701237..3701797 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=967836 NYE53_RS18930 WP_009968329.1 3697337..3697456(+) (phrF) [Bacillus sp. FSL R5-0523]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=967836 NYE53_RS18930 WP_009968329.1 3697337..3697456(+) (phrF) [Bacillus sp. FSL R5-0523]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATCTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment