Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   MKY61_RS10680 Genome accession   NZ_CP150247
Coordinates   2059720..2060148 (+) Length   142 a.a.
NCBI ID   WP_003182220.1    Uniprot ID   A0A1Y0YFI7
Organism   Bacillus sp. FSL M8-0315     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2054720..2065148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY61_RS10650 (MKY61_10650) - 2054903..2055511 (+) 609 WP_009328237.1 flavin reductase family protein -
  MKY61_RS10655 (MKY61_10655) wrbA 2055712..2056323 (+) 612 WP_003182210.1 NAD(P)H:quinone oxidoreductase -
  MKY61_RS10660 (MKY61_10660) - 2056644..2056784 (+) 141 WP_003182211.1 hypothetical protein -
  MKY61_RS10665 (MKY61_10665) - 2056777..2057610 (+) 834 WP_003182213.1 prohibitin family protein -
  MKY61_RS10670 (MKY61_10670) - 2057701..2058462 (+) 762 WP_003182215.1 hypothetical protein -
  MKY61_RS10675 (MKY61_10675) - 2058522..2059361 (+) 840 WP_003182218.1 thymidylate synthase -
  MKY61_RS10680 (MKY61_10680) nucA/comI 2059720..2060148 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MKY61_RS10685 (MKY61_10685) lexA 2060344..2060967 (-) 624 WP_003182222.1 transcriptional repressor LexA -
  MKY61_RS10690 (MKY61_10690) yneA 2061120..2061431 (+) 312 WP_003182225.1 cell division suppressor protein YneA -
  MKY61_RS10695 (MKY61_10695) - 2061450..2062097 (+) 648 WP_003182227.1 recombinase family protein -
  MKY61_RS10700 (MKY61_10700) - 2062163..2062396 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  MKY61_RS10705 (MKY61_10705) tkt 2062563..2064566 (+) 2004 WP_071583712.1 transketolase -

Sequence


Protein


Download         Length: 142 a.a.        Molecular weight: 15332.29 Da        Isoelectric Point: 7.8987

>NTDB_id=967580 MKY61_RS10680 WP_003182220.1 2059720..2060148(+) (nucA/comI) [Bacillus sp. FSL M8-0315]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ

Nucleotide


Download         Length: 429 bp        

>NTDB_id=967580 MKY61_RS10680 WP_003182220.1 2059720..2060148(+) (nucA/comI) [Bacillus sp. FSL M8-0315]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCCCGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Y0YFI7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

58.73

88.732

0.521


Multiple sequence alignment