Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MKX44_RS19785 Genome accession   NZ_CP150246
Coordinates   3752199..3753356 (-) Length   385 a.a.
NCBI ID   WP_003185733.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0359     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3747199..3758356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX44_RS19755 (MKX44_19755) - 3747443..3747862 (-) 420 WP_003185715.1 TIGR03826 family flagellar region protein -
  MKX44_RS19760 (MKX44_19760) comFC 3747921..3748655 (-) 735 WP_011198352.1 amidophosphoribosyltransferase Machinery gene
  MKX44_RS19765 (MKX44_19765) - 3748612..3748896 (-) 285 WP_003185718.1 competence protein ComFB -
  MKX44_RS19770 (MKX44_19770) comFA 3748951..3750345 (-) 1395 WP_003185720.1 DEAD/DEAH box helicase Machinery gene
  MKX44_RS19775 (MKX44_19775) - 3750466..3751308 (-) 843 WP_003185726.1 DegV family protein -
  MKX44_RS19780 (MKX44_19780) degU 3751428..3752117 (-) 690 WP_003185730.1 two-component system response regulator DegU Regulator
  MKX44_RS19785 (MKX44_19785) degS 3752199..3753356 (-) 1158 WP_003185733.1 histidine kinase Regulator
  MKX44_RS19790 (MKX44_19790) - 3753570..3754208 (+) 639 WP_003185736.1 YigZ family protein -
  MKX44_RS19795 (MKX44_19795) - 3754223..3755299 (+) 1077 WP_003185737.1 LCP family protein -
  MKX44_RS19800 (MKX44_19800) - 3755384..3755758 (-) 375 WP_003185738.1 hypothetical protein -
  MKX44_RS19805 (MKX44_19805) - 3755878..3756942 (-) 1065 WP_003185739.1 MraY family glycosyltransferase -
  MKX44_RS19810 (MKX44_19810) - 3757073..3758254 (-) 1182 WP_011198354.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44636.36 Da        Isoelectric Point: 6.7863

>NTDB_id=967536 MKX44_RS19785 WP_003185733.1 3752199..3753356(-) (degS) [Bacillus sp. FSL M8-0359]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=967536 MKX44_RS19785 WP_003185733.1 3752199..3753356(-) (degS) [Bacillus sp. FSL M8-0359]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

89.351

100

0.894


Multiple sequence alignment