Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACKZ7T_RS09040 Genome accession   NZ_CP176564
Coordinates   1843579..1844853 (+) Length   424 a.a.
NCBI ID   WP_409481329.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0641     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1838579..1849853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7T_RS09020 (ACKZ7T_09020) - 1839903..1839998 (+) 96 WP_031761395.1 hypothetical protein -
  ACKZ7T_RS09025 (ACKZ7T_09025) - 1839959..1841089 (-) 1131 WP_409481328.1 HAD family hydrolase -
  ACKZ7T_RS09030 (ACKZ7T_09030) nagE 1841196..1842662 (-) 1467 WP_000276354.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  ACKZ7T_RS09035 (ACKZ7T_09035) - 1842790..1843407 (-) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  ACKZ7T_RS09040 (ACKZ7T_09040) htrA 1843579..1844853 (+) 1275 WP_409481329.1 S1C family serine protease Regulator
  ACKZ7T_RS09045 (ACKZ7T_09045) tyrS 1844947..1846209 (-) 1263 WP_162635777.1 tyrosine--tRNA ligase -
  ACKZ7T_RS09050 (ACKZ7T_09050) - 1846590..1847495 (+) 906 WP_000184373.1 transglycosylase domain-containing protein -
  ACKZ7T_RS09055 (ACKZ7T_09055) - 1847475..1847567 (-) 93 WP_250414673.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45791.91 Da        Isoelectric Point: 9.8141

>NTDB_id=967534 ACKZ7T_RS09040 WP_409481329.1 1843579..1844853(+) (htrA) [Staphylococcus aureus strain V0641]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGDNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=967534 ACKZ7T_RS09040 WP_409481329.1 1843579..1844853(+) (htrA) [Staphylococcus aureus strain V0641]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGACAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTCATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGTGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGTGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACTAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGTTCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368


Multiple sequence alignment