Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKY62_RS13050 | Genome accession | NZ_CP150217 |
| Coordinates | 2522629..2522964 (+) | Length | 111 a.a. |
| NCBI ID | WP_025804940.1 | Uniprot ID | A0AB37GFT9 |
| Organism | Bacillus sp. FSL R7-0646 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2517629..2527964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY62_RS13030 (MKY62_13030) | gcvT | 2518061..2519155 (-) | 1095 | WP_003183436.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY62_RS13035 (MKY62_13035) | - | 2519748..2521427 (+) | 1680 | WP_003183439.1 | SNF2-related protein | - |
| MKY62_RS13040 (MKY62_13040) | - | 2521434..2522228 (+) | 795 | WP_003183441.1 | YqhG family protein | - |
| MKY62_RS13045 (MKY62_13045) | sinI | 2522419..2522595 (+) | 177 | WP_003183444.1 | anti-repressor SinI family protein | Regulator |
| MKY62_RS13050 (MKY62_13050) | sinR | 2522629..2522964 (+) | 336 | WP_025804940.1 | helix-turn-helix domain-containing protein | Regulator |
| MKY62_RS13055 (MKY62_13055) | - | 2523069..2523863 (-) | 795 | WP_003183447.1 | TasA family protein | - |
| MKY62_RS13060 (MKY62_13060) | - | 2523937..2524521 (-) | 585 | WP_003183449.1 | signal peptidase I | - |
| MKY62_RS13065 (MKY62_13065) | tapA | 2524518..2525246 (-) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKY62_RS13070 (MKY62_13070) | - | 2525556..2525843 (+) | 288 | WP_223307118.1 | YqzG/YhdC family protein | - |
| MKY62_RS13075 (MKY62_13075) | - | 2525867..2526049 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| MKY62_RS13080 (MKY62_13080) | comGG | 2526138..2526503 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| MKY62_RS13085 (MKY62_13085) | comGF | 2526516..2527004 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| MKY62_RS13090 (MKY62_13090) | comGE | 2526913..2527260 (-) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| MKY62_RS13095 (MKY62_13095) | comGD | 2527244..2527681 (-) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12991.60 Da Isoelectric Point: 5.9495
>NTDB_id=966664 MKY62_RS13050 WP_025804940.1 2522629..2522964(+) (sinR) [Bacillus sp. FSL R7-0646]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=966664 MKY62_RS13050 WP_025804940.1 2522629..2522964(+) (sinR) [Bacillus sp. FSL R7-0646]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |