Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   NYE32_RS10380 Genome accession   NZ_CP150201
Coordinates   2210515..2211282 (+) Length   255 a.a.
NCBI ID   WP_037599381.1    Uniprot ID   A0A6N2YYU1
Organism   Streptococcus sp. FSL R7-0248     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2205515..2216282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS10365 (NYE32_10365) - 2207829..2208512 (-) 684 WP_002892206.1 YoaK family protein -
  NYE32_RS10370 (NYE32_10370) rlmH 2208529..2209008 (-) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NYE32_RS10375 (NYE32_10375) htrA 2209214..2210449 (+) 1236 WP_002892211.1 trypsin-like peptidase domain-containing protein Regulator
  NYE32_RS10380 (NYE32_10380) spo0J 2210515..2211282 (+) 768 WP_037599381.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29379.81 Da        Isoelectric Point: 9.4081

>NTDB_id=966202 NYE32_RS10380 WP_037599381.1 2210515..2211282(+) (spo0J) [Streptococcus sp. FSL R7-0248]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHLKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=966202 NYE32_RS10380 WP_037599381.1 2210515..2211282(+) (spo0J) [Streptococcus sp. FSL R7-0248]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACTTAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAGGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N2YYU1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.431

100

0.584


Multiple sequence alignment