Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NST10_RS05320 Genome accession   NZ_CP150198
Coordinates   1072100..1073086 (-) Length   328 a.a.
NCBI ID   WP_339211732.1    Uniprot ID   -
Organism   Staphylococcus sp. FSL W8-0305     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1067100..1078086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST10_RS05295 (NST10_05295) - 1067360..1067707 (-) 348 WP_001242102.1 hypothetical protein -
  NST10_RS05300 (NST10_05300) - 1067893..1068486 (+) 594 WP_000224620.1 CYTH domain-containing protein -
  NST10_RS05305 (NST10_05305) - 1068590..1068955 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  NST10_RS05310 (NST10_05310) yjbH 1068978..1069784 (+) 807 WP_000896691.1 protease adaptor protein YjbH -
  NST10_RS05315 (NST10_05315) pepF 1070244..1072052 (-) 1809 WP_000082722.1 oligoendopeptidase F -
  NST10_RS05320 (NST10_05320) coiA 1072100..1073086 (-) 987 WP_339211732.1 competence protein CoiA family protein Machinery gene
  NST10_RS05325 (NST10_05325) mecA 1073207..1073926 (-) 720 WP_001217728.1 adaptor protein MecA -
  NST10_RS05330 (NST10_05330) spxA 1074297..1074692 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  NST10_RS05335 (NST10_05335) trpS 1074987..1075976 (+) 990 WP_000448933.1 tryptophan--tRNA ligase -
  NST10_RS05340 (NST10_05340) - 1076003..1077649 (-) 1647 WP_125899125.1 IS1182-like element ISSau3 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38741.30 Da        Isoelectric Point: 9.6486

>NTDB_id=966031 NST10_RS05320 WP_339211732.1 1072100..1073086(-) (coiA) [Staphylococcus sp. FSL W8-0305]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIIMFQQIQYLGGHKYVAEKKNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDHEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNINYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=966031 NST10_RS05320 WP_339211732.1 1072100..1073086(-) (coiA) [Staphylococcus sp. FSL W8-0305]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATTATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAAGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCACGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATATTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966

Multiple sequence alignment