Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NST10_RS02195 Genome accession   NZ_CP150198
Coordinates   411120..411806 (+) Length   228 a.a.
NCBI ID   WP_001794049.1    Uniprot ID   A0A0E1X4U4
Organism   Staphylococcus sp. FSL W8-0305     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 406120..416806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST10_RS02160 (NST10_02160) yqeH 406647..407747 (+) 1101 WP_001280132.1 ribosome biogenesis GTPase YqeH -
  NST10_RS02165 (NST10_02165) aroE 407761..408567 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  NST10_RS02170 (NST10_02170) yhbY 408571..408861 (+) 291 WP_000955232.1 ribosome assembly RNA-binding protein YhbY -
  NST10_RS02175 (NST10_02175) nadD 408864..409433 (+) 570 WP_000822938.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  NST10_RS02180 (NST10_02180) yqeK 409423..410007 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  NST10_RS02185 (NST10_02185) rsfS 410008..410361 (+) 354 WP_001088020.1 ribosome silencing factor -
  NST10_RS02190 (NST10_02190) - 410364..411080 (+) 717 WP_000084835.1 class I SAM-dependent methyltransferase -
  NST10_RS02195 (NST10_02195) comEA 411120..411806 (+) 687 WP_001794049.1 ComEA family DNA-binding protein Machinery gene
  NST10_RS02200 (NST10_02200) - 411898..412359 (+) 462 WP_000439692.1 ComE operon protein 2 -
  NST10_RS02205 (NST10_02205) comEC 412364..414565 (+) 2202 WP_000967506.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NST10_RS02210 (NST10_02210) holA 414622..415596 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  NST10_RS02215 (NST10_02215) rpsT 415641..415892 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25766.38 Da        Isoelectric Point: 9.3383

>NTDB_id=966016 NST10_RS02195 WP_001794049.1 411120..411806(+) (comEA) [Staphylococcus sp. FSL W8-0305]
MVLLYQFLLRYKDFLAQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTVLKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLNSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=966016 NST10_RS02195 WP_001794049.1 411120..411806(+) (comEA) [Staphylococcus sp. FSL W8-0305]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAGCTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
TTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAATTCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1X4U4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

95.595

99.561

0.952
  comEA Staphylococcus aureus N315

95.595

99.561

0.952

Multiple sequence alignment