Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NST06_RS15570 Genome accession   NZ_CP150197
Coordinates   2961583..2962224 (-) Length   213 a.a.
NCBI ID   WP_024423322.1    Uniprot ID   A0AAP7QNQ1
Organism   Bacillus sp. FSL P4-0322     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2956583..2967224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST06_RS15535 (NST06_15535) - 2957709..2958140 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  NST06_RS15540 (NST06_15540) - 2958140..2958481 (+) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  NST06_RS15545 (NST06_15545) - 2958474..2959952 (+) 1479 WP_024425940.1 Na+/H+ antiporter subunit D -
  NST06_RS15550 (NST06_15550) - 2959959..2960438 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  NST06_RS15555 (NST06_15555) - 2960438..2960719 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  NST06_RS15560 (NST06_15560) mnhG 2960703..2961077 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  NST06_RS15565 (NST06_15565) - 2961170..2961559 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  NST06_RS15570 (NST06_15570) comA 2961583..2962224 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  NST06_RS15575 (NST06_15575) comP 2962305..2964611 (-) 2307 WP_339240207.1 ATP-binding protein Regulator
  NST06_RS15580 (NST06_15580) comX 2964625..2964795 (-) 171 WP_012011107.1 competence pheromone ComX -
  NST06_RS15585 (NST06_15585) - 2964773..2965696 (-) 924 WP_339240210.1 polyprenyl synthetase family protein -
  NST06_RS15590 (NST06_15590) degQ 2965848..2965988 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NST06_RS15595 (NST06_15595) - 2966494..2966850 (+) 357 WP_024425946.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24149.54 Da        Isoelectric Point: 4.6344

>NTDB_id=965992 NST06_RS15570 WP_024423322.1 2961583..2962224(-) (comA) [Bacillus sp. FSL P4-0322]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=965992 NST06_RS15570 WP_024423322.1 2961583..2962224(-) (comA) [Bacillus sp. FSL P4-0322]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGATTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATCAGCAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGGACATTGCAAGGAGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGATCTCTTAACCGAACGGGAATGTTTGATC
CTTAGAGAAGTAGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723

Multiple sequence alignment