Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST06_RS05150 Genome accession   NZ_CP150197
Coordinates   1025137..1026087 (+) Length   316 a.a.
NCBI ID   WP_024426541.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0322     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1020137..1031087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST06_RS05125 (NST06_05125) - 1021627..1022487 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  NST06_RS05130 (NST06_05130) - 1022544..1022780 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  NST06_RS05135 (NST06_05135) comK 1023070..1023648 (+) 579 WP_034621820.1 competence protein ComK Regulator
  NST06_RS05140 (NST06_05140) - 1023948..1024430 (+) 483 WP_024426543.1 hypothetical protein -
  NST06_RS05145 (NST06_05145) - 1024697..1024975 (+) 279 WP_034621828.1 barstar family protein -
  NST06_RS05150 (NST06_05150) ceuB 1025137..1026087 (+) 951 WP_024426541.1 ABC transporter permease Machinery gene
  NST06_RS05155 (NST06_05155) - 1026080..1027030 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  NST06_RS05160 (NST06_05160) - 1027021..1027779 (+) 759 WP_024426539.1 ATP-binding cassette domain-containing protein -
  NST06_RS05165 (NST06_05165) - 1027801..1028745 (+) 945 WP_056766096.1 siderophore ABC transporter substrate-binding protein -
  NST06_RS05170 (NST06_05170) - 1028883..1029836 (+) 954 WP_024425490.1 LCP family protein -
  NST06_RS05175 (NST06_05175) - 1029909..1030271 (-) 363 WP_024425491.1 hypothetical protein -
  NST06_RS05180 (NST06_05180) - 1030428..1031045 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34960.36 Da        Isoelectric Point: 9.7476

>NTDB_id=965958 NST06_RS05150 WP_024426541.1 1025137..1026087(+) (ceuB) [Bacillus sp. FSL P4-0322]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=965958 NST06_RS05150 WP_024426541.1 1025137..1026087(+) (ceuB) [Bacillus sp. FSL P4-0322]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATTGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGTCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTATATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.163

95.253

0.487

Multiple sequence alignment