Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST56_RS02205 Genome accession   NZ_CP150195
Coordinates   431794..432744 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0560     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426794..437744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS02180 (NST56_02180) rapC 428209..429357 (+) 1149 WP_268444289.1 response regulator aspartate phosphatase RapC Regulator
  NST56_RS02185 (NST56_02185) phrC 429341..429463 (+) 123 WP_010333023.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NST56_RS02190 (NST56_02190) - 429568..429660 (-) 93 WP_026014660.1 YjcZ family sporulation protein -
  NST56_RS02195 (NST56_02195) - 429808..429927 (-) 120 WP_268504129.1 YjcZ family sporulation protein -
  NST56_RS02200 (NST56_02200) - 430044..431408 (-) 1365 WP_268444290.1 aspartate kinase -
  NST56_RS02205 (NST56_02205) ceuB 431794..432744 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  NST56_RS02210 (NST56_02210) yclO 432737..433684 (+) 948 WP_010333026.1 petrobactin ABC transporter permease YclO -
  NST56_RS02215 (NST56_02215) yclP 433678..434436 (+) 759 WP_268444292.1 petrobactin ABC transporter ATP-binding protein YclP -
  NST56_RS02220 (NST56_02220) - 434458..435411 (+) 954 WP_339179650.1 siderophore ABC transporter substrate-binding protein -
  NST56_RS02225 (NST56_02225) - 435460..436878 (-) 1419 WP_339179652.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=965818 NST56_RS02205 WP_010333025.1 431794..432744(+) (ceuB) [Bacillus sp. FSL R5-0560]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=965818 NST56_RS02205 WP_010333025.1 431794..432744(+) (ceuB) [Bacillus sp. FSL R5-0560]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATCTAAGCAAAGAAGAGGCATCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTTTAA
TTGCAGGGATGAGCATGAGCATCTGCGGCCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACGACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCATTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTCTAGTCGGTAATTTTCTGTTTATGAAAATTCTTGAAAGAATTAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACTTGATC
CAAAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAAAGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATTTACAGAGGAGACAACCTAAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538

Multiple sequence alignment