Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NST56_RS00245 | Genome accession | NZ_CP150195 |
| Coordinates | 44352..44642 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. FSL R5-0560 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39352..49642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST56_RS00205 (NST56_00205) | darA | 39372..39701 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| NST56_RS00210 (NST56_00210) | - | 39714..40154 (+) | 441 | WP_010332684.1 | YaaR family protein | - |
| NST56_RS00215 (NST56_00215) | holB | 40166..41155 (+) | 990 | WP_010332685.1 | DNA polymerase III subunit delta' | - |
| NST56_RS00220 (NST56_00220) | ricT | 41158..41985 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| NST56_RS00225 (NST56_00225) | yabA | 42000..42359 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| NST56_RS00230 (NST56_00230) | - | 42420..43163 (+) | 744 | WP_010332688.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NST56_RS00235 (NST56_00235) | - | 43150..43449 (+) | 300 | WP_339179241.1 | GIY-YIG nuclease family protein | - |
| NST56_RS00240 (NST56_00240) | rsmI | 43424..44302 (+) | 879 | WP_026014644.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NST56_RS00245 (NST56_00245) | abrB | 44352..44642 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| NST56_RS00250 (NST56_00250) | metG | 45139..47133 (+) | 1995 | WP_326197401.1 | methionine--tRNA ligase | - |
| NST56_RS00255 (NST56_00255) | - | 47212..47979 (+) | 768 | WP_010332691.1 | TatD family hydrolase | - |
| NST56_RS00260 (NST56_00260) | - | 48225..49448 (+) | 1224 | WP_229150235.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=965809 NST56_RS00245 WP_003226760.1 44352..44642(-) (abrB) [Bacillus sp. FSL R5-0560]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=965809 NST56_RS00245 WP_003226760.1 44352..44642(-) (abrB) [Bacillus sp. FSL R5-0560]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |