Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AABJ90_RS00385 Genome accession   NZ_AP028964
Coordinates   69237..70031 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain NA05 = NBRC 116153     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 64237..75031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABJ90_RS00365 (BsubNA05_00690) walR 64479..65186 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  AABJ90_RS00370 (BsubNA05_00700) walK 65194..67029 (+) 1836 WP_024572714.1 cell wall metabolism sensor histidine kinase WalK -
  AABJ90_RS00375 (BsubNA05_00710) walH 67019..68386 (+) 1368 WP_003226936.1 WalRK two-component regulatory system regulator WalH -
  AABJ90_RS00380 (BsubNA05_00720) walI 68373..69215 (+) 843 WP_046161072.1 WalRK two-component regulatory system regulator WalI -
  AABJ90_RS00385 (BsubNA05_00730) vicX 69237..70031 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  AABJ90_RS00390 (BsubNA05_00740) htrA 70113..71315 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  AABJ90_RS00395 - 71336..71462 (+) 127 Protein_74 hypothetical protein -
  AABJ90_RS00400 (BsubNA05_00750) - 71459..71959 (-) 501 WP_338382319.1 PepSY domain-containing protein -
  AABJ90_RS00405 (BsubNA05_00760) - 72120..73019 (-) 900 WP_338382320.1 PepSY domain-containing protein -
  AABJ90_RS00410 (BsubNA05_00770) - 73231..73914 (+) 684 WP_048654834.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=96566 AABJ90_RS00385 WP_003226939.1 69237..70031(+) (vicX) [Bacillus subtilis strain NA05 = NBRC 116153]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=96566 AABJ90_RS00385 WP_003226939.1 69237..70031(+) (vicX) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53