Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACKFA7_RS18785 Genome accession   NZ_CP175553
Coordinates   3851235..3852029 (-) Length   264 a.a.
NCBI ID   WP_007614969.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 4-9-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3846235..3857029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKFA7_RS18765 (ACKFA7_18765) - 3846594..3847601 (-) 1008 WP_038460529.1 ThiF family adenylyltransferase -
  ACKFA7_RS18770 (ACKFA7_18770) - 3847834..3849252 (-) 1419 WP_038460532.1 cell wall metabolism sensor histidine kinase WalK -
  ACKFA7_RS18775 (ACKFA7_18775) - 3849249..3849461 (-) 213 WP_032875422.1 winged helix-turn-helix domain-containing protein -
  ACKFA7_RS18780 (ACKFA7_18780) htrA 3849952..3851148 (-) 1197 WP_007614967.1 S1C family serine protease Regulator
  ACKFA7_RS18785 (ACKFA7_18785) vicX 3851235..3852029 (-) 795 WP_007614969.1 MBL fold metallo-hydrolase Regulator
  ACKFA7_RS18790 (ACKFA7_18790) - 3852044..3852883 (-) 840 WP_007614971.1 two-component system regulatory protein YycI -
  ACKFA7_RS18795 (ACKFA7_18795) yycH 3852870..3854228 (-) 1359 WP_015418614.1 two-component system activity regulator YycH -
  ACKFA7_RS18800 (ACKFA7_18800) walK 3854218..3856053 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  ACKFA7_RS18805 (ACKFA7_18805) walR 3856060..3856767 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29130.19 Da        Isoelectric Point: 6.0271

>NTDB_id=965645 ACKFA7_RS18785 WP_007614969.1 3851235..3852029(-) (vicX) [Bacillus amyloliquefaciens strain 4-9-2]
MGLQFSVLASGSTGNAFYLETDEHSFLVDAGLSGKAMDGLMERIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=965645 ACKFA7_RS18785 WP_007614969.1 3851235..3852029(-) (vicX) [Bacillus amyloliquefaciens strain 4-9-2]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGATGAGCACTCTTTTCT
GGTAGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAGAATCGGCCGCAAGATAGACGACGTCGACGGCA
TTTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGACTTCCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTGAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCGCTGATGACGGACACCGGGTATGTGAGCGACAGAATGAAAGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCCAATGAAGATGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527