Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSU19_RS13130 | Genome accession | NZ_CP150190 |
| Coordinates | 2721503..2722570 (-) | Length | 355 a.a. |
| NCBI ID | WP_066247583.1 | Uniprot ID | - |
| Organism | Aeribacillus sp. FSL k6-2211 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2716503..2727570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU19_RS13090 (NSU19_13090) | - | 2717447..2718244 (+) | 798 | WP_063388101.1 | YqhG family protein | - |
| NSU19_RS13095 (NSU19_13095) | - | 2718335..2718514 (-) | 180 | WP_063388100.1 | YqzE family protein | - |
| NSU19_RS13100 (NSU19_13100) | comGG | 2718634..2719005 (-) | 372 | WP_063388099.1 | competence type IV pilus minor pilin ComGG | - |
| NSU19_RS13105 (NSU19_13105) | comGF | 2719002..2719493 (-) | 492 | WP_130156367.1 | competence type IV pilus minor pilin ComGF | - |
| NSU19_RS13110 (NSU19_13110) | - | 2719423..2719749 (-) | 327 | WP_063388097.1 | hypothetical protein | - |
| NSU19_RS13115 (NSU19_13115) | comGD | 2719733..2720194 (-) | 462 | WP_063388096.1 | competence type IV pilus minor pilin ComGD | - |
| NSU19_RS13120 (NSU19_13120) | comGC | 2720163..2720474 (-) | 312 | WP_063388095.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSU19_RS13125 (NSU19_13125) | comGB | 2720479..2721510 (-) | 1032 | WP_066247584.1 | competence type IV pilus assembly protein ComGB | - |
| NSU19_RS13130 (NSU19_13130) | comGA | 2721503..2722570 (-) | 1068 | WP_066247583.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSU19_RS13135 (NSU19_13135) | - | 2722887..2723132 (+) | 246 | WP_063388092.1 | DUF2626 domain-containing protein | - |
| NSU19_RS13140 (NSU19_13140) | - | 2723187..2723831 (-) | 645 | WP_339196837.1 | MBL fold metallo-hydrolase | - |
| NSU19_RS13145 (NSU19_13145) | - | 2724077..2724250 (+) | 174 | WP_065095533.1 | DUF2759 domain-containing protein | - |
| NSU19_RS13150 (NSU19_13150) | - | 2724367..2725485 (-) | 1119 | WP_144596792.1 | hypothetical protein | - |
| NSU19_RS13155 (NSU19_13155) | - | 2725555..2726676 (-) | 1122 | WP_066247575.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40503.35 Da Isoelectric Point: 8.6397
>NTDB_id=965625 NSU19_RS13130 WP_066247583.1 2721503..2722570(-) (comGA) [Aeribacillus sp. FSL k6-2211]
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
Nucleotide
Download Length: 1068 bp
>NTDB_id=965625 NSU19_RS13130 WP_066247583.1 2721503..2722570(-) (comGA) [Aeribacillus sp. FSL k6-2211]
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCTAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACACGATCCCGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCTAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACACGATCCCGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
62.606 |
99.437 |
0.623 |
| pilB | Glaesserella parasuis strain SC1401 |
39.706 |
95.775 |
0.38 |
| pilF | Thermus thermophilus HB27 |
42.809 |
84.225 |
0.361 |