Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ94_RS06465 | Genome accession | NZ_CP150189 |
| Coordinates | 1303797..1304864 (+) | Length | 355 a.a. |
| NCBI ID | WP_066247583.1 | Uniprot ID | - |
| Organism | Aeribacillus sp. FSL K6-2833 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1298797..1309864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ94_RS06440 (NSQ94_06440) | - | 1299691..1300812 (+) | 1122 | WP_066247575.1 | M14 family metallocarboxypeptidase | - |
| NSQ94_RS06445 (NSQ94_06445) | - | 1300882..1302000 (+) | 1119 | WP_144596792.1 | hypothetical protein | - |
| NSQ94_RS06450 (NSQ94_06450) | - | 1302117..1302290 (-) | 174 | WP_065095533.1 | DUF2759 domain-containing protein | - |
| NSQ94_RS06455 (NSQ94_06455) | - | 1302536..1303180 (+) | 645 | WP_066247578.1 | MBL fold metallo-hydrolase | - |
| NSQ94_RS06460 (NSQ94_06460) | - | 1303235..1303480 (-) | 246 | WP_063388092.1 | DUF2626 domain-containing protein | - |
| NSQ94_RS06465 (NSQ94_06465) | comGA | 1303797..1304864 (+) | 1068 | WP_066247583.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ94_RS06470 (NSQ94_06470) | comGB | 1304857..1305888 (+) | 1032 | WP_066247584.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ94_RS06475 (NSQ94_06475) | comGC | 1305893..1306204 (+) | 312 | WP_063388095.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ94_RS06480 (NSQ94_06480) | comGD | 1306173..1306634 (+) | 462 | WP_158640149.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ94_RS06485 (NSQ94_06485) | - | 1306618..1306944 (+) | 327 | WP_063388097.1 | hypothetical protein | - |
| NSQ94_RS06490 (NSQ94_06490) | comGF | 1306934..1307365 (+) | 432 | WP_206752135.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ94_RS06495 (NSQ94_06495) | comGG | 1307362..1307733 (+) | 372 | WP_066247591.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ94_RS06500 (NSQ94_06500) | - | 1307853..1308032 (+) | 180 | WP_063388100.1 | YqzE family protein | - |
| NSQ94_RS06505 (NSQ94_06505) | - | 1308123..1308920 (-) | 798 | WP_063388101.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40503.35 Da Isoelectric Point: 8.6397
>NTDB_id=965568 NSQ94_RS06465 WP_066247583.1 1303797..1304864(+) (comGA) [Aeribacillus sp. FSL K6-2833]
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQSPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
Nucleotide
Download Length: 1068 bp
>NTDB_id=965568 NSQ94_RS06465 WP_066247583.1 1303797..1304864(+) (comGA) [Aeribacillus sp. FSL K6-2833]
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCTAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACACGATCCCGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCTAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAATCGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACACGATCCCGATGTCATTATGGTCG
GTGAAATTCGGGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
62.606 |
99.437 |
0.623 |
| pilB | Glaesserella parasuis strain SC1401 |
39.706 |
95.775 |
0.38 |
| pilF | Thermus thermophilus HB27 |
42.809 |
84.225 |
0.361 |