Detailed information NTG0096556

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAA995_RS10775
• Genome accession: NZ_AP028877
• Coordinates: 2091439..2092536 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266661.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 21P20
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2086439..2097536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA995_RS10750 (SP21P20_20860)	pgsA	2086960..2087505 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AAA995_RS10755 (SP21P20_20870)	rodZ	2087516..2088337 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AAA995_RS10760 (SP21P20_20880)	-	2088379..2089662 (-)	1284	WP_000170191.1	pitrilysin family protein	-
AAA995_RS10765 (SP21P20_20890)	-	2089659..2090909 (-)	1251	WP_000424269.1	pitrilysin family protein	-
AAA995_RS10770 (SP21P20_20900)	-	2091068..2091436 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
AAA995_RS10775 (SP21P20_20910)	recF	2091439..2092536 (+)	1098	WP_000266661.1	DNA replication/repair protein RecF	Machinery gene
AAA995_RS10780 (SP21P20_20920)	guaB	2092587..2094065 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
AAA995_RS10785 (SP21P20_20930)	trpS	2094217..2095242 (-)	1026	WP_000165446.1	tryptophan--tRNA ligase	-
AAA995_RS10790 (SP21P20_20940)	-	2095448..2097070 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41999.13 Da
• Isoelectric Point: 9.3081

>NTDB_id=96556 AAA995_RS10775 WP_000266661.1 2091439..2092536(+) (recF) [Streptococcus pneumoniae strain 21P20]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNRN

Nucleotide

• Length: 1098 bp

>NTDB_id=96556 AAA995_RS10775 WP_000266661.1 2091439..2092536(+) (recF) [Streptococcus pneumoniae strain 21P20]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATAGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46