Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NSQ42_RS19555 Genome accession   NZ_CP150184
Coordinates   3747918..3748037 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL W8-0812     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3742918..3753037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ42_RS19530 (NSQ42_19530) albG 3743082..3743783 (+) 702 WP_195727705.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NSQ42_RS19535 (NSQ42_19535) - 3743789..3745165 (-) 1377 WP_003244415.1 YncE family protein -
  NSQ42_RS19540 (NSQ42_19540) - 3745204..3746559 (-) 1356 WP_195727704.1 YncE family protein -
  NSQ42_RS19545 (NSQ42_19545) - 3746556..3746786 (-) 231 WP_015714889.1 hypothetical protein -
  NSQ42_RS19550 (NSQ42_19550) rapF 3746789..3747934 (+) 1146 WP_015714890.1 response regulator aspartate phosphatase RapF Regulator
  NSQ42_RS19555 (NSQ42_19555) phrF 3747918..3748037 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NSQ42_RS19560 (NSQ42_19560) - 3748294..3748773 (+) 480 WP_015714892.1 hypothetical protein -
  NSQ42_RS19565 (NSQ42_19565) - 3748922..3749710 (+) 789 WP_015714893.1 membrane protein -
  NSQ42_RS19570 (NSQ42_19570) - 3749733..3750371 (+) 639 WP_198421573.1 hypothetical protein -
  NSQ42_RS19575 (NSQ42_19575) - 3750387..3751178 (+) 792 WP_250622481.1 hypothetical protein -
  NSQ42_RS19580 (NSQ42_19580) - 3751181..3751828 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  NSQ42_RS19585 (NSQ42_19585) - 3751821..3752381 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=965396 NSQ42_RS19555 WP_009968329.1 3747918..3748037(+) (phrF) [Bacillus sp. FSL W8-0812]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=965396 NSQ42_RS19555 WP_009968329.1 3747918..3748037(+) (phrF) [Bacillus sp. FSL W8-0812]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment