Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ42_RS02175 Genome accession   NZ_CP150184
Coordinates   431699..432649 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus sp. FSL W8-0812     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426699..437649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ42_RS02150 (NSQ42_02150) rapC 428159..429307 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  NSQ42_RS02155 (NSQ42_02155) phrC 429291..429413 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NSQ42_RS02160 (NSQ42_02160) - 429513..429602 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NSQ42_RS02165 (NSQ42_02165) - 429684..429797 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  NSQ42_RS02170 (NSQ42_02170) - 429950..431314 (-) 1365 WP_029726569.1 aspartate kinase -
  NSQ42_RS02175 (NSQ42_02175) ceuB 431699..432649 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NSQ42_RS02180 (NSQ42_02180) yclO 432642..433589 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  NSQ42_RS02185 (NSQ42_02185) yclP 433583..434341 (+) 759 WP_195727644.1 petrobactin ABC transporter ATP-binding protein YclP -
  NSQ42_RS02190 (NSQ42_02190) yclQ 434363..435316 (+) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NSQ42_RS02195 (NSQ42_02195) - 435363..436781 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=965333 NSQ42_RS02175 WP_014475804.1 431699..432649(+) (ceuB) [Bacillus sp. FSL W8-0812]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=965333 NSQ42_RS02175 WP_014475804.1 431699..432649(+) (ceuB) [Bacillus sp. FSL W8-0812]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment