Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NSU05_RS18980 Genome accession   NZ_CP150177
Coordinates   3692265..3692384 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. EU52     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3687265..3697384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU05_RS18955 (NSU05_18955) albG 3687428..3688129 (+) 702 WP_038429793.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NSU05_RS18960 (NSU05_18960) - 3688135..3689511 (-) 1377 WP_038429794.1 YncE family protein -
  NSU05_RS18965 (NSU05_18965) - 3689551..3690906 (-) 1356 WP_038429795.1 YncE family protein -
  NSU05_RS18970 (NSU05_18970) - 3690903..3691133 (-) 231 WP_038429796.1 hypothetical protein -
  NSU05_RS18975 (NSU05_18975) rapF 3691136..3692281 (+) 1146 WP_038429797.1 response regulator aspartate phosphatase RapF Regulator
  NSU05_RS18980 (NSU05_18980) phrF 3692265..3692384 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NSU05_RS18985 (NSU05_18985) - 3692638..3693117 (+) 480 WP_015714892.1 hypothetical protein -
  NSU05_RS18990 (NSU05_18990) - 3693266..3694054 (+) 789 WP_015714893.1 membrane protein -
  NSU05_RS18995 (NSU05_18995) - 3694041..3694715 (+) 675 WP_015714894.1 hypothetical protein -
  NSU05_RS19000 (NSU05_19000) - 3694725..3695522 (+) 798 WP_231573542.1 hypothetical protein -
  NSU05_RS19005 (NSU05_19005) - 3695525..3696172 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  NSU05_RS19010 (NSU05_19010) - 3696165..3696725 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=965119 NSU05_RS18980 WP_009968329.1 3692265..3692384(+) (phrF) [Bacillus sp. EU52]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=965119 NSU05_RS18980 WP_009968329.1 3692265..3692384(+) (phrF) [Bacillus sp. EU52]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment