Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NSU05_RS01955 Genome accession   NZ_CP150177
Coordinates   364143..364541 (-) Length   132 a.a.
NCBI ID   WP_017696126.1    Uniprot ID   A0AAP2LZ45
Organism   Bacillus sp. EU52     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 359143..369541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU05_RS01925 (NSU05_01925) - 359721..360401 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  NSU05_RS01930 (NSU05_01930) - 360411..361274 (-) 864 WP_029727074.1 transporter substrate-binding domain-containing protein -
  NSU05_RS01935 (NSU05_01935) - 361436..361633 (+) 198 WP_119122841.1 hypothetical protein -
  NSU05_RS01940 (NSU05_01940) - 361652..362107 (+) 456 WP_038428340.1 RDD family protein -
  NSU05_RS01945 (NSU05_01945) - 362189..362521 (+) 333 WP_015252849.1 YckD family protein -
  NSU05_RS01950 (NSU05_01950) bglC 362673..364106 (+) 1434 WP_038428341.1 6-phospho-beta-glucosidase -
  NSU05_RS01955 (NSU05_01955) nin/comJ 364143..364541 (-) 399 WP_017696126.1 DNA-entry nuclease inhibitor Regulator
  NSU05_RS01960 (NSU05_01960) nucA/comI 364568..365017 (-) 450 WP_017696127.1 DNA-entry nuclease Machinery gene
  NSU05_RS01965 (NSU05_01965) tlpC 365185..366906 (-) 1722 WP_038428342.1 methyl-accepting chemotaxis protein TlpC -
  NSU05_RS01970 (NSU05_01970) hxlB 367017..367574 (-) 558 WP_038428343.1 6-phospho-3-hexuloisomerase -
  NSU05_RS01975 (NSU05_01975) hxlA 367580..368212 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  NSU05_RS01980 (NSU05_01980) hxlR 368446..368808 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14949.93 Da        Isoelectric Point: 4.8991

>NTDB_id=965050 NSU05_RS01955 WP_017696126.1 364143..364541(-) (nin/comJ) [Bacillus sp. EU52]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HITENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=965050 NSU05_RS01955 WP_017696126.1 364143..364541(-) (nin/comJ) [Bacillus sp. EU52]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCACCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCGTATGAAAAAAAAGTGACTGTTCCTTTT
CATATCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTATCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977

Multiple sequence alignment