Detailed information NTG0965039

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NSU16_RS18685
• Genome accession: NZ_CP150176
• Coordinates: 3663965..3665110 (+)
• Length: 381 a.a.
• NCBI ID: WP_010332288.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-1003
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3658965..3670110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU16_RS18665 (NSU16_18665)	-	3659008..3660285 (+)	1278	WP_339191705.1	pitrilysin family protein	-
NSU16_RS18670 (NSU16_18670)	-	3660282..3660983 (+)	702	WP_339191706.1	bacteriocin biosynthesis protein AlbG	-
NSU16_RS18675 (NSU16_18675)	-	3660990..3662345 (-)	1356	WP_339178732.1	YncE family protein	-
NSU16_RS18680 (NSU16_18680)	-	3662386..3663738 (-)	1353	WP_339191707.1	YncE family protein	-
NSU16_RS18685 (NSU16_18685)	rapF	3663965..3665110 (+)	1146	WP_010332288.1	tetratricopeptide repeat protein	Regulator
NSU16_RS18690 (NSU16_18690)	phrF	3665094..3665213 (+)	120	WP_010332289.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NSU16_RS18695 (NSU16_18695)	speB	3665348..3666220 (-)	873	WP_339191708.1	agmatinase	-
NSU16_RS18700 (NSU16_18700)	speE	3666281..3667111 (-)	831	WP_168749008.1	spermidine synthase	-
NSU16_RS18705 (NSU16_18705)	-	3667312..3669387 (+)	2076	WP_339191709.1	transglycosylase domain-containing protein	-
NSU16_RS18710 (NSU16_18710)	-	3669420..3669842 (-)	423	WP_326203975.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45602.14 Da
• Isoelectric Point: 5.3790

>NTDB_id=965039 NSU16_RS18685 WP_010332288.1 3663965..3665110(+) (rapF) [Bacillus sp. FSL K6-1003]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELAQIEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHTAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYTMAESEKQPQLMGRTLYNIGLCKNSQEQYES
AITYFKRAISVFEEANILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGIAYSKEAGDIIYLSEFEFLKSLYLSGPDEEAI
QTFFDFLESKMMYADLEDFALDVAKYYHGRENFQKASAYFLKVEQVRQLIQGGVKLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=965039 NSU16_RS18685 WP_010332288.1 3663965..3665110(+) (rapF) [Bacillus sp. FSL K6-1003]
GTGACAAGTGTCATATCTTCTTCTTCCGTGGGAGAAAAGATTAATGAATGGTACATGTACATACGCCGATTCAGCATACC
GGATGCGGAATACTTACGAAGAGAAATCAAACAAGAGCTGGCCCAAATAGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAAAATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATTGATAAAAAACAGGCTCGTTTAACCGGAGTCCTTGATTATTACTTTAATTTTTTCAG
GGGCATGTACGAACTGGACCAGCGGGAGTACTTGTCTGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATTTTTG
TAAAGGATCGAATAGAAAAAGCTGAGTTTTTCTTTAAAATGTCTGAATCTTACTACTATATGAAACAAACGTATTTTTCC
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAGCACACGGCATATAATATTAGATTGCTTCAATGCCATTCTTT
GTTTGCTACCAACTTCTTAGATCTCAAGCAATATGAGGACGCCATATCACATTTCAAAAAAGCTTATACAATGGCTGAAT
CCGAAAAACAGCCCCAATTAATGGGAAGAACGCTGTACAACATTGGGCTTTGCAAAAACAGCCAAGAACAGTATGAGTCA
GCAATCACATATTTCAAAAGAGCCATATCCGTTTTTGAAGAAGCTAACATACTTCCTTCTCTGCCCCAAGCTTATTTTTT
GATTACACAAATTCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAAGGAATTGCTTATTCTAAAG
AGGCCGGAGATATCATTTACTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCTGGCCCGGATGAAGAGGCAATT
CAAACATTCTTCGATTTTCTCGAAAGTAAAATGATGTATGCTGATCTTGAAGATTTTGCGCTTGATGTGGCAAAATATTA
TCATGGACGTGAAAATTTCCAAAAAGCTTCCGCGTATTTTCTGAAGGTGGAACAAGTAAGACAGCTTATTCAAGGAGGAG
TGAAATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	93.176	100	0.932
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572