Detailed information NTG0965013

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: NSU16_RS12675
• Genome accession: NZ_CP150176
• Coordinates: 2482959..2485289 (-)
• Length: 776 a.a.
• NCBI ID: WP_268505137.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-1003
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2477959..2490289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU16_RS12640 (NSU16_12640)	-	2478298..2478636 (-)	339	WP_029441371.1	YqxA family protein	-
NSU16_RS12645 (NSU16_12645)	spoIIP	2478653..2479858 (-)	1206	WP_268445830.1	spore autolysin SpoIIP	-
NSU16_RS12650 (NSU16_12650)	gpr	2479921..2481027 (-)	1107	WP_010335002.1	GPR endopeptidase	-
NSU16_RS12655 (NSU16_12655)	rpsT	2481232..2481498 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
NSU16_RS12660 (NSU16_12660)	holA	2481516..2482556 (-)	1041	WP_010335004.1	DNA polymerase III subunit delta	-
NSU16_RS12665 (NSU16_12665)	-	2482596..2482745 (-)	150	WP_003229985.1	hypothetical protein	-
NSU16_RS12670 (NSU16_12670)	-	2482786..2482920 (+)	135	WP_010335005.1	YqzM family protein	-
NSU16_RS12675 (NSU16_12675)	comEC	2482959..2485289 (-)	2331	WP_268505137.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NSU16_RS12680 (NSU16_12680)	-	2485293..2485862 (-)	570	WP_010335007.1	ComE operon protein 2	-
NSU16_RS12685 (NSU16_12685)	comEA	2485929..2486546 (-)	618	WP_268504969.1	helix-hairpin-helix domain-containing protein	Machinery gene
NSU16_RS12690 (NSU16_12690)	comER	2486630..2487451 (+)	822	WP_268449344.1	late competence protein ComER	-
NSU16_RS12695 (NSU16_12695)	-	2487516..2488259 (-)	744	WP_268504968.1	class I SAM-dependent methyltransferase	-
NSU16_RS12700 (NSU16_12700)	rsfS	2488256..2488612 (-)	357	WP_168748278.1	ribosome silencing factor	-
NSU16_RS12705 (NSU16_12705)	yqeK	2488630..2489190 (-)	561	WP_168748279.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NSU16_RS12710 (NSU16_12710)	-	2489180..2489749 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
NSU16_RS12715 (NSU16_12715)	yhbY	2489760..2490050 (-)	291	WP_268504967.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86423.70 Da
• Isoelectric Point: 8.9679

>NTDB_id=965013 NSU16_RS12675 WP_268505137.1 2482959..2485289(-) (comEC) [Bacillus sp. FSL K6-1003]
MRHSRLLLPLAAASATAGISAASYFSAVFLFFLFLLIVSVKTRQAPLIFVCLFSFVLNFALFKITDFQNTSSYKQGSYHF
KAVVHSIPKIDGDRMSLLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGTLEKPKQATVPGTFDYHQYLYRQHI
HWSYSVTSIRNCSQSSGVRYKLLSLRKYIVSFTNTKLPSDSAGIVQALTVGERSYLDDDVLNAYQNLGVVHLLAISGLHV
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHSKTGLGQLTMVSVIAQLGSLPILLYHFQQFSIMSIPMNMVLVPFYTFCILPAA
VIGVILLFFSASVGQFLFYWFDVMMTWTNRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKRSYLRLTVSAG
LFCATLTLLFIFPYVSSDGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSEPHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGSLSWLLTGDLEKEGEQEIISVFPNIRADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKNGSGTFSVYPPYDTSDMTKEN

Nucleotide

• Length: 2331 bp

>NTDB_id=965013 NSU16_RS12675 WP_268505137.1 2482959..2485289(-) (comEC) [Bacillus sp. FSL K6-1003]
ATGCGACATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTTCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTTTCTTCTAATTGTGTCAGTCAAAACAAGACAGGCTCCACTCATTTTTGTATGTTTATTCT
CTTTTGTGCTCAATTTTGCCCTGTTTAAGATTACAGATTTTCAAAATACTTCTTCGTACAAGCAGGGCAGCTATCACTTC
AAGGCGGTCGTTCATAGTATTCCTAAAATTGACGGAGATCGGATGTCTTTGTTGATCAAGACGCCTGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAGAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTACTTTGGAGAAGCCCAAACAAGCAACAGTGCCGGGAACATTTGATTATCACCAGTATCTTTACCGGCAGCATATT
CATTGGAGCTACTCTGTCACATCTATTAGAAATTGCAGTCAGTCTTCAGGTGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTCACGAACACCAAGCTTCCGTCAGATTCAGCAGGAATCGTACAGGCGCTTACTGTAGGTGAGAGGT
CTTATTTGGATGACGATGTGCTTAACGCTTACCAAAATCTAGGTGTTGTCCATCTATTAGCCATCTCAGGCCTCCATGTC
GGAATTTTGACAGCTGGCCTATTTTACGCAATGATCCGTCTGGGTATAACAAGAGAAAATGCGTCAATCCTACTCCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGCGCAGCGCCTTCTGTTCTCCGAGCCGCTCTGATGTCGGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCAGGGGTAATCTGTCTTTCGTATATCGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCATCTATTTTTCAGCA
TAGCAAAACGGGTCTGGGACAGCTGACGATGGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATTATGAGCATTCCGATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
GTTATAGGAGTGATTCTATTATTTTTTTCAGCATCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GACCAACAGACTGATCACTAAAATCGCAGATATAGAAATATTCACAATCATCATCTCACGTCCTGCACCCGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATCGAGAAACGCTCATATCTCCGGCTGACCGTATCCGCAGGC
CTTTTTTGTGCAACGCTTACCCTGCTCTTTATTTTCCCTTATGTTAGTTCCGATGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCCTATCAGAAAGGCCGTGTTTTAATTGATACAGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAGCTTGATGCGCTGATACTGACGCACGCAGATCAGGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTAAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCTGAACCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGGGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTGCAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGTCTCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGATTATTAGTGTCTTCCCAAATATAAGAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCGATCATCTCAGCGGGAGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATCCATCCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAACGGATCAGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATGACAA
AGGAGAATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (22-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	78.479	100	0.785