Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NSU16_RS12235 | Genome accession | NZ_CP150176 |
| Coordinates | 2404017..2405054 (-) | Length | 345 a.a. |
| NCBI ID | WP_339190988.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-1003 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2399017..2410054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU16_RS12185 (NSU16_12185) | tasA | 2399110..2399895 (-) | 786 | WP_168748227.1 | biofilm matrix protein TasA | - |
| NSU16_RS12190 (NSU16_12190) | - | 2399960..2400544 (-) | 585 | WP_339190980.1 | signal peptidase I | - |
| NSU16_RS12195 (NSU16_12195) | tapA | 2400516..2401277 (-) | 762 | WP_339190983.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU16_RS12200 (NSU16_12200) | - | 2401554..2401877 (+) | 324 | WP_168748230.1 | YqzG/YhdC family protein | - |
| NSU16_RS12205 (NSU16_12205) | - | 2401920..2402099 (-) | 180 | WP_003236949.1 | YqzE family protein | - |
| NSU16_RS12210 (NSU16_12210) | comGG | 2402171..2402545 (-) | 375 | WP_286058321.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| NSU16_RS12215 (NSU16_12215) | comGF | 2402546..2402929 (-) | 384 | WP_026014740.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NSU16_RS12220 (NSU16_12220) | comGE | 2402955..2403302 (-) | 348 | WP_168748233.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NSU16_RS12225 (NSU16_12225) | comGD | 2403286..2403717 (-) | 432 | WP_168748234.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NSU16_RS12230 (NSU16_12230) | comGC | 2403707..2404003 (-) | 297 | WP_168748235.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSU16_RS12235 (NSU16_12235) | comGB | 2404017..2405054 (-) | 1038 | WP_339190988.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NSU16_RS12240 (NSU16_12240) | comGA | 2405041..2406111 (-) | 1071 | WP_168748237.1 | competence protein ComGA | Machinery gene |
| NSU16_RS12245 (NSU16_12245) | - | 2406464..2406634 (-) | 171 | WP_339190991.1 | hypothetical protein | - |
| NSU16_RS12250 (NSU16_12250) | - | 2406866..2407816 (-) | 951 | WP_010334929.1 | magnesium transporter CorA family protein | - |
| NSU16_RS12255 (NSU16_12255) | - | 2407960..2409289 (+) | 1330 | Protein_2363 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39986.12 Da Isoelectric Point: 9.6879
>NTDB_id=965010 NSU16_RS12235 WP_339190988.1 2404017..2405054(-) (comGB) [Bacillus sp. FSL K6-1003]
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLAAAIRRLREGESFYHVLKSLSFHKEAIGICY
FAETHGELPTSMIQSGELLERKTAQAEHIKRVLRYPLFLIFTVGVMLYMLQNIIIPQFSGIYQSMNVETSRTTGIIFAFF
QHLDAVFILMAILAAGIGLYYWFVFKKKSPDRQMHICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIEQLKAGETIETALDKHPFYESDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLAAAIRRLREGESFYHVLKSLSFHKEAIGICY
FAETHGELPTSMIQSGELLERKTAQAEHIKRVLRYPLFLIFTVGVMLYMLQNIIIPQFSGIYQSMNVETSRTTGIIFAFF
QHLDAVFILMAILAAGIGLYYWFVFKKKSPDRQMHICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIEQLKAGETIETALDKHPFYESDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=965010 NSU16_RS12235 WP_339190988.1 2404017..2405054(-) (comGB) [Bacillus sp. FSL K6-1003]
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGGGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGGTTGCGCCTAATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTGCCGCAATAA
GACGGCTGAGAGAAGGAGAATCGTTTTACCATGTATTAAAGAGCTTGTCATTTCATAAGGAAGCCATTGGTATTTGTTAT
TTTGCTGAAACACATGGAGAATTGCCGACTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAACAGCGCAGGCAGA
GCATATTAAAAGGGTGCTGAGATATCCTCTTTTTCTCATCTTTACCGTTGGTGTCATGCTCTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACTTCACGCACAACAGGCATCATTTTTGCGTTTTTT
CAGCACCTTGATGCCGTCTTCATATTAATGGCCATTTTGGCCGCAGGGATAGGTCTTTATTATTGGTTTGTGTTTAAGAA
AAAATCCCCTGACCGCCAAATGCACATTTGCGTAAGTATTCCTCTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTTCTGGCATCAGGACTTTCTATTTATGACAGTTTGAAAGCATTTAGACATCAAACG
TTTCTTCCTTTCTACCGCCACGAAGCTGAACAAATGATTGAACAGTTAAAAGCCGGTGAAACCATTGAAACTGCTTTAGA
CAAACACCCTTTTTACGAAAGTGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGTTTGGACCGGGAACTCT
TCACGTACAGTCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAT
GGATTTGTAGCAGCGATGATTTTAATTGTGTATTTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGGGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGGTTGCGCCTAATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTGCCGCAATAA
GACGGCTGAGAGAAGGAGAATCGTTTTACCATGTATTAAAGAGCTTGTCATTTCATAAGGAAGCCATTGGTATTTGTTAT
TTTGCTGAAACACATGGAGAATTGCCGACTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAACAGCGCAGGCAGA
GCATATTAAAAGGGTGCTGAGATATCCTCTTTTTCTCATCTTTACCGTTGGTGTCATGCTCTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACTTCACGCACAACAGGCATCATTTTTGCGTTTTTT
CAGCACCTTGATGCCGTCTTCATATTAATGGCCATTTTGGCCGCAGGGATAGGTCTTTATTATTGGTTTGTGTTTAAGAA
AAAATCCCCTGACCGCCAAATGCACATTTGCGTAAGTATTCCTCTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTTCTGGCATCAGGACTTTCTATTTATGACAGTTTGAAAGCATTTAGACATCAAACG
TTTCTTCCTTTCTACCGCCACGAAGCTGAACAAATGATTGAACAGTTAAAAGCCGGTGAAACCATTGAAACTGCTTTAGA
CAAACACCCTTTTTACGAAAGTGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGTTTGGACCGGGAACTCT
TCACGTACAGTCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAT
GGATTTGTAGCAGCGATGATTTTAATTGTGTATTTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
80.805 |
93.623 |
0.757 |