Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NSU16_RS11985 Genome accession   NZ_CP150176
Coordinates   2363884..2364687 (-) Length   267 a.a.
NCBI ID   WP_010334880.1    Uniprot ID   A0A9Q4HNW6
Organism   Bacillus sp. FSL K6-1003     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2358884..2369687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS11960 (NSU16_11960) - 2359880..2360623 (-) 744 WP_168748205.1 glycerophosphodiester phosphodiesterase -
  NSU16_RS11965 (NSU16_11965) - 2360713..2361333 (-) 621 WP_326227250.1 N-acetylmuramoyl-L-alanine amidase -
  NSU16_RS11970 (NSU16_11970) - 2361356..2361649 (-) 294 WP_032731307.1 hypothetical protein -
  NSU16_RS11975 (NSU16_11975) - 2361977..2362111 (+) 135 WP_168748207.1 hypothetical protein -
  NSU16_RS11980 (NSU16_11980) - 2362184..2363302 (+) 1119 WP_326217989.1 NADH-dependent flavin oxidoreductase -
  NSU16_RS11985 (NSU16_11985) spo0A 2363884..2364687 (-) 804 WP_010334880.1 sporulation transcription factor Spo0A Regulator
  NSU16_RS11990 (NSU16_11990) spoIVB 2364963..2366240 (-) 1278 WP_168748211.1 SpoIVB peptidase -
  NSU16_RS11995 (NSU16_11995) recN 2366601..2368331 (-) 1731 WP_339190959.1 DNA repair protein RecN Machinery gene
  NSU16_RS12000 (NSU16_12000) argR 2368367..2368816 (-) 450 WP_010334883.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29719.20 Da        Isoelectric Point: 6.3913

>NTDB_id=965001 NSU16_RS11985 WP_010334880.1 2363884..2364687(-) (spo0A) [Bacillus sp. FSL K6-1003]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKRKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=965001 NSU16_RS11985 WP_010334880.1 2363884..2364687(-) (spo0A) [Bacillus sp. FSL K6-1003]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGAGTTGCTTATAACGGACAGGAATGTCTGTCGCTATTTAAAGAAAAAGATCCTGATGTGCTCG
TCTTGGACATTATTATGCCGCATTTGGACGGACTTGCTGTTTTAGAGCGACTGAGAGAATCAGATCTGAAAAAACAGCCA
AACGTCATCATGCTGACAGCCTTCGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGAGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATTCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGCGCGC
CGTCATCACAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAAAGGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCTGCACATATTAAAGGCTATCTCTATCTGCGTGAAGCGATCTCAATGGTGTATAACGACAT
CGAACTGCTCGGCAGTATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAATACAACCGCTAGCCGTGTAGAGA
GAGCGATCCGCCACGCAATTGAAGTGGCATGGAGCAGAGGGAATATTGATTCCATATCCTCATTGTTCGGTTATACAGTC
AGCATGACGAAGGCAAAACCTACAAATTCAGAGTTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996

Multiple sequence alignment