Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC   Type   Machinery gene
Locus tag   NSS75_RS13630 Genome accession   NZ_CP150175
Coordinates   2637651..2639981 (-) Length   776 a.a.
NCBI ID   WP_339237638.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2632651..2644981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS13595 (NSS75_13595) - 2632991..2633329 (-) 339 WP_024122107.1 YqxA family protein -
  NSS75_RS13600 (NSS75_13600) spoIIP 2633346..2634551 (-) 1206 WP_101861061.1 spore autolysin SpoIIP -
  NSS75_RS13605 (NSS75_13605) gpr 2634614..2635720 (-) 1107 WP_044154490.1 GPR endopeptidase -
  NSS75_RS13610 (NSS75_13610) rpsT 2635924..2636190 (+) 267 WP_010335003.1 30S ribosomal protein S20 -
  NSS75_RS13615 (NSS75_13615) holA 2636205..2637248 (-) 1044 WP_095713316.1 DNA polymerase III subunit delta -
  NSS75_RS13620 (NSS75_13620) - 2637288..2637437 (-) 150 WP_003229985.1 hypothetical protein -
  NSS75_RS13625 (NSS75_13625) - 2637478..2637612 (+) 135 WP_010335005.1 YqzM family protein -
  NSS75_RS13630 (NSS75_13630) comEC 2637651..2639981 (-) 2331 WP_339237638.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NSS75_RS13635 (NSS75_13635) - 2639985..2640554 (-) 570 WP_010335007.1 ComE operon protein 2 -
  NSS75_RS13640 (NSS75_13640) comEA 2640621..2641238 (-) 618 WP_339233380.1 helix-hairpin-helix domain-containing protein Machinery gene
  NSS75_RS13645 (NSS75_13645) comER 2641322..2642143 (+) 822 WP_095713318.1 late competence protein ComER -
  NSS75_RS13650 (NSS75_13650) - 2642208..2642951 (-) 744 WP_024122114.1 class I SAM-dependent methyltransferase -
  NSS75_RS13655 (NSS75_13655) rsfS 2642948..2643304 (-) 357 WP_024122115.1 ribosome silencing factor -
  NSS75_RS13660 (NSS75_13660) yqeK 2643322..2643882 (-) 561 WP_106020125.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  NSS75_RS13665 (NSS75_13665) - 2643872..2644441 (-) 570 WP_010335014.1 nicotinate-nucleotide adenylyltransferase -
  NSS75_RS13670 (NSS75_13670) yhbY 2644452..2644742 (-) 291 WP_339233384.1 ribosome assembly RNA-binding protein YhbY -

Sequence


Protein


Download         Length: 776 a.a.        Molecular weight: 86277.52 Da        Isoelectric Point: 7.8416

>NTDB_id=964932 NSS75_RS13630 WP_339237638.1 2637651..2639981(-) (comEC) [Bacillus sp. FSL K6-1012]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLFLLIVSIKTRHAPLIFVCLFSFVLNVALFKITDSQNTSSYQQGSYHF
KAVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGTLEKPKQATVPGTFDYQQYLYRQHI
HWSYSVTSIGNCSEPSDVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSASVGQFLFYWFDVMMTWTNRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFLRLTVSTG
LFCATLILLFVFPYVSSEGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSEPHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGRLSWLLTGDLEKEGEQEVIDVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKSGSGTFSVYPPYDTSDMTETN

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=964932 NSS75_RS13630 WP_339237638.1 2637651..2639981(-) (comEC) [Bacillus sp. FSL K6-1012]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTTTCTTCTTATTGTGTCAATCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTCAATGTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGCAGCTATCACTTC
AAGGCGGTTATTCATAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTACTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAGCATATT
CATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGATGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTTACGAACACGCAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTAGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGGATTTTGACAGCAGGCCTATTTTACGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCTTCTGTTCTCCGAGCCGCTCTGATGTCCGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCGTCTATTTTTCAGCA
TATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATCATTAGCATTCCGATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAGCGTCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GACCAACAGACTGATCACTAAAATCGCTGATATAGAAATATTCACAATCATCATCTCTCGCCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCTCCGGCTGACAGTGTCCACAGGC
CTTTTTTGTGCAACACTTATCCTGCTCTTTGTTTTCCCTTATGTTAGTTCCGAGGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGTGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAGCTTGATGCGCTGATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCTGAACCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGTGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGCTCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCGATGTGTTCCCAAATATAAAAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATCCATTCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAGCGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

79.768

100

0.798


Multiple sequence alignment