Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ41_RS13095 | Genome accession | NZ_CP150172 |
| Coordinates | 2704598..2705665 (-) | Length | 355 a.a. |
| NCBI ID | WP_130156359.1 | Uniprot ID | - |
| Organism | Aeribacillus sp. FSL K6-8210 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2699598..2710665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ41_RS13055 (NSQ41_13055) | - | 2700542..2701339 (+) | 798 | WP_063388101.1 | YqhG family protein | - |
| NSQ41_RS13060 (NSQ41_13060) | - | 2701430..2701609 (-) | 180 | WP_063388100.1 | YqzE family protein | - |
| NSQ41_RS13065 (NSQ41_13065) | comGG | 2701729..2702100 (-) | 372 | WP_339210105.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ41_RS13070 (NSQ41_13070) | comGF | 2702097..2702588 (-) | 492 | WP_130156367.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ41_RS13075 (NSQ41_13075) | - | 2702518..2702844 (-) | 327 | WP_063388097.1 | hypothetical protein | - |
| NSQ41_RS13080 (NSQ41_13080) | comGD | 2702828..2703289 (-) | 462 | WP_158640149.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ41_RS13085 (NSQ41_13085) | comGC | 2703258..2703569 (-) | 312 | WP_063388095.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ41_RS13090 (NSQ41_13090) | comGB | 2703574..2704605 (-) | 1032 | WP_066247584.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ41_RS13095 (NSQ41_13095) | comGA | 2704598..2705665 (-) | 1068 | WP_130156359.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ41_RS13100 (NSQ41_13100) | - | 2705982..2706227 (+) | 246 | WP_063388092.1 | DUF2626 domain-containing protein | - |
| NSQ41_RS13105 (NSQ41_13105) | - | 2706282..2706926 (-) | 645 | WP_063388091.1 | MBL fold metallo-hydrolase | - |
| NSQ41_RS13110 (NSQ41_13110) | - | 2707173..2707346 (+) | 174 | WP_065095533.1 | DUF2759 domain-containing protein | - |
| NSQ41_RS13115 (NSQ41_13115) | - | 2707463..2708581 (-) | 1119 | WP_339210106.1 | hypothetical protein | - |
| NSQ41_RS13120 (NSQ41_13120) | - | 2708638..2709759 (-) | 1122 | WP_339210107.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40517.38 Da Isoelectric Point: 8.6397
>NTDB_id=964794 NSQ41_RS13095 WP_130156359.1 2704598..2705665(-) (comGA) [Aeribacillus sp. FSL K6-8210]
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQTPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
MIEIEKLSEKLIELACSFSASDIHIVPKKKKAVIQFRIDDDIKEIFHLPKAICERLISHFKFMAQMDIGEKRRPQNGAYS
FHTIYGEVHLRLSTLPTVFDESLVIRILLEQSIQTPEKLSLFPSESKKMLSFLKHSHGLLILTGPTGSGKTTTLYSLLHY
AKKHFKRNIITLEDPVETKSDEMLQVQINEKAGITYANGLKAILRHDPDVIMVGEIRDHETARIAVRAGLSGHLVLTTMH
TRDAKGAIYRLLEFGVTFSEIEQTLIAVAAQRLVHLICPFCKGNCPPYCKKLKEIRRIGVYELLYGKNLTAAIREAKGEE
QSELDYMKLKDVIKKGIALGYLYPDIYDRWVFEYE
Nucleotide
Download Length: 1068 bp
>NTDB_id=964794 NSQ41_RS13095 WP_130156359.1 2704598..2705665(-) (comGA) [Aeribacillus sp. FSL K6-8210]
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAAACGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCGGATGTCATTATGGTCG
GTGAAATTCGAGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
ATGATTGAAATTGAAAAGCTTAGCGAAAAACTGATTGAACTGGCGTGTTCATTTAGTGCCTCAGACATCCATATTGTTCC
GAAAAAGAAAAAAGCAGTTATTCAATTTCGAATTGACGATGACATCAAAGAAATATTTCATCTGCCAAAAGCTATTTGTG
AACGCTTAATTTCTCATTTTAAATTTATGGCCCAAATGGATATTGGCGAAAAAAGGCGTCCGCAAAACGGTGCTTACTCC
TTCCATACGATTTACGGAGAGGTGCATCTTCGTTTATCGACATTGCCTACAGTATTCGATGAAAGTCTAGTCATCCGAAT
ATTGCTAGAGCAATCGATTCAAACGCCTGAAAAACTTTCATTGTTCCCGTCAGAATCCAAAAAAATGCTTTCATTTTTAA
AGCATTCTCACGGTCTCCTGATCCTTACCGGTCCGACCGGTTCGGGAAAAACGACCACTCTTTATTCGCTTCTCCATTAT
GCAAAAAAACATTTTAAAAGAAACATCATCACACTTGAAGATCCTGTGGAAACGAAAAGCGATGAAATGCTTCAAGTGCA
GATCAATGAAAAAGCTGGAATTACGTATGCAAATGGGTTAAAAGCAATATTAAGACATGATCCGGATGTCATTATGGTCG
GTGAAATTCGAGATCATGAGACAGCAAGGATTGCGGTCCGGGCTGGGCTTAGCGGACATTTAGTACTGACCACCATGCAT
ACGCGGGATGCAAAGGGAGCTATTTATCGATTATTAGAATTTGGTGTAACCTTTTCCGAAATTGAGCAAACTTTGATCGC
TGTTGCTGCGCAGCGTCTCGTTCATTTAATATGCCCGTTTTGCAAAGGGAATTGCCCGCCTTATTGCAAAAAATTAAAGG
AAATTAGGAGAATTGGGGTCTATGAACTTCTTTACGGCAAAAATTTAACCGCCGCTATTCGGGAAGCAAAAGGAGAGGAG
CAGAGTGAGTTAGATTATATGAAGTTAAAAGATGTAATTAAAAAAGGAATCGCTCTTGGGTATTTATATCCGGACATATA
TGATCGTTGGGTGTTTGAATATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
62.323 |
99.437 |
0.62 |
| pilB | Glaesserella parasuis strain SC1401 |
40.058 |
96.338 |
0.386 |
| pilF | Thermus thermophilus HB27 |
42.809 |
84.225 |
0.361 |