Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NYE79_RS02215 Genome accession   NZ_CP150168
Coordinates   433080..433811 (+) Length   243 a.a.
NCBI ID   WP_101800368.1    Uniprot ID   -
Organism   Streptococcus sp. FSL W8-0197     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 428080..438811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS02190 (NYE79_02190) dnaK 428110..429933 (+) 1824 WP_042902036.1 molecular chaperone DnaK -
  NYE79_RS02195 (NYE79_02195) dnaJ 430381..431517 (+) 1137 WP_001066312.1 molecular chaperone DnaJ -
  NYE79_RS02200 (NYE79_02200) - 431594..432247 (-) 654 WP_185758138.1 hypothetical protein -
  NYE79_RS02205 (NYE79_02205) - 432314..432592 (-) 279 WP_125384973.1 hypothetical protein -
  NYE79_RS02210 (NYE79_02210) - 432602..433012 (-) 411 WP_125384974.1 HIT family protein -
  NYE79_RS02215 (NYE79_02215) pptA 433080..433811 (+) 732 WP_101800368.1 ABC transporter ATP-binding protein Regulator
  NYE79_RS02220 (NYE79_02220) - 433808..434857 (+) 1050 WP_101800369.1 ABC transporter permease -
  NYE79_RS02225 (NYE79_02225) - 434915..435244 (-) 330 WP_101800370.1 helicase BlpT -
  NYE79_RS02230 (NYE79_02230) - 435523..435861 (+) 339 WP_101800371.1 LytTR family DNA-binding domain-containing protein -
  NYE79_RS02235 (NYE79_02235) comE/blpR 435866..436603 (+) 738 WP_101800372.1 LytTR family DNA-binding domain-containing protein Regulator
  NYE79_RS02240 (NYE79_02240) - 436617..437957 (+) 1341 WP_095726453.1 sensor histidine kinase -
  NYE79_RS02245 (NYE79_02245) blpC 438000..438155 (-) 156 WP_000360258.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27186.65 Da        Isoelectric Point: 4.7960

>NTDB_id=964596 NYE79_RS02215 WP_101800368.1 433080..433811(+) (pptA) [Streptococcus sp. FSL W8-0197]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLRDAFAMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=964596 NYE79_RS02215 WP_101800368.1 433080..433811(+) (pptA) [Streptococcus sp. FSL W8-0197]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTCCCTGTCTTGAAAGATGTGTCCTTTACCGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGGCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGGGAAATCAAGATTAACGGTCTCACCCTGCGAGAAGATGCGACCAACTATCGCAAGCAGATTGGCTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCCTATGGTATTGAGCAAAA
AGTGGCTTTTGAGCGAGTAGAATCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCATTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTAGATCCGAGTCTTTTCATCGTTGATGAGCCTTTC
CTTGGGCTCGATCCTTTGGCCATTTCTGACTTGATCCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTAGACTCAGCGGAAAAGATGTGTGATGCCTTTGTCATTCTCCACAAGGGGGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTGCGGGATGCTTTTGCCATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment