Detailed information NTG0096444

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAA995_RS00335
• Genome accession: NZ_AP028877
• Coordinates: 53774..54667 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 21P20
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 48774..59667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA995_RS00295 (SP21P20_00570)	-	49087..50256 (+)	1170	WP_000366345.1	pyridoxal phosphate-dependent aminotransferase	-
AAA995_RS00300 (SP21P20_00580)	recO	50253..51023 (+)	771	WP_000616167.1	DNA repair protein RecO	Machinery gene
AAA995_RS00305 (SP21P20_00590)	plsX	51020..52012 (+)	993	WP_000717453.1	phosphate acyltransferase PlsX	-
AAA995_RS00310 (SP21P20_00600)	-	52018..52251 (+)	234	WP_000136447.1	acyl carrier protein	-
AAA995_RS00315 (SP21P20_00610)	-	52297..52587 (+)	291	Protein_55	transposase family protein	-
AAA995_RS00320 (SP21P20_00620)	blpU	52790..53020 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
AAA995_RS00325	-	53023..53148 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
AAA995_RS00330	-	53559..53753 (+)	195	WP_000756776.1	hypothetical protein	-
AAA995_RS00335 (SP21P20_00630)	comR	53774..54667 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
AAA995_RS00340 (SP21P20_00640)	-	55210..55506 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
AAA995_RS00345	-	55513..56649 (+)	1137	WP_000698828.1	hypothetical protein	-
AAA995_RS00350 (SP21P20_00650)	-	56646..57128 (+)	483	WP_001232094.1	stage II sporulation protein M	-
AAA995_RS00355 (SP21P20_00660)	-	57125..57721 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
AAA995_RS00360 (SP21P20_00670)	-	57702..58193 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=96444 AAA995_RS00335 WP_000343888.1 53774..54667(+) (comR) [Streptococcus pneumoniae strain 21P20]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=96444 AAA995_RS00335 WP_000343888.1 53774..54667(+) (comR) [Streptococcus pneumoniae strain 21P20]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37