Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGE   Type   Machinery gene
Locus tag   NSQ53_RS13545 Genome accession   NZ_CP150164
Coordinates   2579121..2579468 (-) Length   115 a.a.
NCBI ID   WP_003230165.1    Uniprot ID   A0AAE2SKU3
Organism   Bacillus sp. PS11(2022) isolate PS11     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2574121..2584468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ53_RS13500 (NSQ53_13500) sinI 2574646..2574819 (+) 174 WP_003230187.1 anti-repressor SinI family protein Regulator
  NSQ53_RS13505 (NSQ53_13505) sinR 2574853..2575188 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  NSQ53_RS13510 (NSQ53_13510) tasA 2575281..2576066 (-) 786 WP_003230183.1 biofilm matrix protein TasA -
  NSQ53_RS13515 (NSQ53_13515) - 2576130..2576702 (-) 573 WP_003230181.1 signal peptidase I -
  NSQ53_RS13520 (NSQ53_13520) tapA 2576686..2577447 (-) 762 WP_003230180.1 amyloid fiber anchoring/assembly protein TapA -
  NSQ53_RS13525 (NSQ53_13525) - 2577719..2578045 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  NSQ53_RS13530 (NSQ53_13530) - 2578087..2578266 (-) 180 WP_003230176.1 YqzE family protein -
  NSQ53_RS13535 (NSQ53_13535) comGG 2578337..2578711 (-) 375 WP_003230170.1 ComG operon protein ComGG Machinery gene
  NSQ53_RS13540 (NSQ53_13540) comGF 2578712..2579095 (-) 384 WP_003230168.1 ComG operon protein ComGF Machinery gene
  NSQ53_RS13545 (NSQ53_13545) comGE 2579121..2579468 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  NSQ53_RS13550 (NSQ53_13550) comGD 2579452..2579883 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  NSQ53_RS13555 (NSQ53_13555) comGC 2579873..2580169 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  NSQ53_RS13560 (NSQ53_13560) comGB 2580183..2581220 (-) 1038 WP_009967727.1 comG operon protein ComGB Machinery gene
  NSQ53_RS13565 (NSQ53_13565) comGA 2581207..2582277 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  NSQ53_RS13570 (NSQ53_13570) corA 2582689..2583642 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13271.33 Da        Isoelectric Point: 5.1901

>NTDB_id=964409 NSQ53_RS13545 WP_003230165.1 2579121..2579468(-) (comGE) [Bacillus sp. PS11(2022) isolate PS11]
MWRENKGFSTIETMSALSLWLFVLLTVVPLWDKLMADEKMAESREIGYQMMNESISKYVMSGEGAASKTITKNNHIYAMK
WEEEGEYQNVCIKAAAYKEKSFCLSILQTEWLHAS

Nucleotide


Download         Length: 348 bp        

>NTDB_id=964409 NSQ53_RS13545 WP_003230165.1 2579121..2579468(-) (comGE) [Bacillus sp. PS11(2022) isolate PS11]
ATGTGGAGAGAAAATAAAGGTTTTTCTACAATAGAAACAATGTCTGCGCTAAGCCTGTGGCTGTTTGTGCTGCTGACAGT
CGTCCCCTTGTGGGACAAGCTGATGGCTGATGAAAAAATGGCGGAATCACGAGAAATTGGCTATCAGATGATGAATGAGA
GCATTAGCAAATATGTCATGAGTGGTGAAGGAGCCGCGTCAAAAACGATTACAAAGAACAATCATATCTATGCAATGAAG
TGGGAGGAGGAGGGCGAATATCAAAACGTATGTATCAAAGCCGCAGCTTATAAAGAAAAATCATTTTGCCTCAGCATTTT
GCAGACAGAATGGCTACACGCTTCTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment