Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   NSQ81_RS18585 Genome accession   NZ_CP150163
Coordinates   3577590..3578747 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus sp. PS65     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3572590..3583747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ81_RS18555 (NSQ81_18555) - 3572843..3573262 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  NSQ81_RS18560 (NSQ81_18560) comFC 3573336..3574058 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  NSQ81_RS18565 (NSQ81_18565) comFB 3574022..3574318 (-) 297 WP_003227989.1 late competence protein ComFB -
  NSQ81_RS18570 (NSQ81_18570) comFA 3574378..3575769 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  NSQ81_RS18575 (NSQ81_18575) - 3575875..3576720 (-) 846 WP_003244125.1 DegV family protein -
  NSQ81_RS18580 (NSQ81_18580) degU 3576818..3577507 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  NSQ81_RS18585 (NSQ81_18585) degS 3577590..3578747 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  NSQ81_RS18590 (NSQ81_18590) - 3578964..3579617 (+) 654 WP_003227979.1 YigZ family protein -
  NSQ81_RS18595 (NSQ81_18595) tagV 3579617..3580792 (+) 1176 WP_003244117.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  NSQ81_RS18600 (NSQ81_18600) - 3580865..3581941 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  NSQ81_RS18605 (NSQ81_18605) - 3582086..3583279 (-) 1194 WP_003243252.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=964351 NSQ81_RS18585 WP_003227983.1 3577590..3578747(-) (degS) [Bacillus sp. PS65]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=964351 NSQ81_RS18585 WP_003227983.1 3577590..3578747(-) (degS) [Bacillus sp. PS65]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment