Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSS90_RS12690 | Genome accession | NZ_CP150161 |
| Coordinates | 2467325..2468395 (-) | Length | 356 a.a. |
| NCBI ID | WP_069322755.1 | Uniprot ID | - |
| Organism | Bacillus sp. PS93 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2462325..2473395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS90_RS12645 (NSS90_12645) | tapA | 2462804..2463565 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSS90_RS12650 (NSS90_12650) | - | 2463837..2464163 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSS90_RS12655 (NSS90_12655) | - | 2464205..2464384 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| NSS90_RS12660 (NSS90_12660) | comGG | 2464455..2464829 (-) | 375 | WP_167408283.1 | ComG operon protein ComGG | Machinery gene |
| NSS90_RS12665 (NSS90_12665) | comGF | 2464830..2465213 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NSS90_RS12670 (NSS90_12670) | comGE | 2465239..2465586 (-) | 348 | WP_167408284.1 | ComG operon protein 5 | Machinery gene |
| NSS90_RS12675 (NSS90_12675) | comGD | 2465570..2466001 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| NSS90_RS12680 (NSS90_12680) | comGC | 2465991..2466287 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| NSS90_RS12685 (NSS90_12685) | comGB | 2466301..2467338 (-) | 1038 | WP_339174855.1 | comG operon protein ComGB | Machinery gene |
| NSS90_RS12690 (NSS90_12690) | comGA | 2467325..2468395 (-) | 1071 | WP_069322755.1 | competence protein ComGA | Machinery gene |
| NSS90_RS12695 (NSS90_12695) | - | 2468657..2468806 (-) | 150 | WP_250540178.1 | hypothetical protein | - |
| NSS90_RS12700 (NSS90_12700) | corA | 2468808..2469761 (-) | 954 | WP_339174859.1 | magnesium transporter CorA | - |
| NSS90_RS12705 (NSS90_12705) | - | 2469904..2471232 (+) | 1329 | WP_033884708.1 | hemolysin family protein | - |
| NSS90_RS12710 (NSS90_12710) | rsbRD | 2471285..2472121 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
| NSS90_RS12720 (NSS90_12720) | mgsR | 2472345..2472725 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NSS90_RS12725 (NSS90_12725) | - | 2472957..2473202 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40457.66 Da Isoelectric Point: 9.1812
>NTDB_id=964157 NSS90_RS12690 WP_069322755.1 2467325..2468395(-) (comGA) [Bacillus sp. PS93]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIQQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIQQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=964157 NSS90_RS12690 WP_069322755.1 2467325..2468395(-) (comGA) [Bacillus sp. PS93]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCCAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAATTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCCAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAATTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilB | Glaesserella parasuis strain SC1401 |
43.878 |
82.584 |
0.362 |