Detailed information NTG0964023

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NST79_RS19565
• Genome accession: NZ_CP150159
• Coordinates: 3773775..3774920 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus sp. PS196
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3768775..3779920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST79_RS19540 (NST79_19540)	-	3768798..3770078 (+)	1281	WP_212060275.1	pitrilysin family protein	-
NST79_RS19545 (NST79_19545)	albG	3770075..3770776 (+)	702	WP_212060273.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NST79_RS19550 (NST79_19550)	-	3770782..3772151 (-)	1370	Protein_3792	YncE family protein	-
NST79_RS19555 (NST79_19555)	-	3772190..3773545 (-)	1356	WP_015250986.1	YncE family protein	-
NST79_RS19560 (NST79_19560)	-	3773542..3773772 (-)	231	WP_069703618.1	hypothetical protein	-
NST79_RS19565 (NST79_19565)	rapF	3773775..3774920 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
NST79_RS19570 (NST79_19570)	phrF	3774904..3775023 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NST79_RS19575 (NST79_19575)	-	3775138..3775587 (+)	450	WP_339225783.1	YbaK/EbsC family protein	-
NST79_RS19580 (NST79_19580)	speB	3775619..3776491 (-)	873	WP_003227545.1	agmatinase	-
NST79_RS19585 (NST79_19585)	speE	3776552..3777382 (-)	831	WP_003227543.1	spermidine synthase	-
NST79_RS19590 (NST79_19590)	-	3777585..3779660 (+)	2076	WP_033883392.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=964023 NST79_RS19565 WP_029318693.1 3773775..3774920(+) (rapF) [Bacillus sp. PS196]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=964023 NST79_RS19565 WP_029318693.1 3773775..3774920(+) (rapF) [Bacillus sp. PS196]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572