Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NST79_RS16530 Genome accession   NZ_CP150159
Coordinates   3162555..3164867 (-) Length   770 a.a.
NCBI ID   WP_198878535.1    Uniprot ID   -
Organism   Bacillus sp. PS196     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3157555..3169867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST79_RS16490 (NST79_16490) - 3158020..3158451 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NST79_RS16495 (NST79_16495) - 3158451..3158792 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NST79_RS16500 (NST79_16500) - 3158785..3160266 (+) 1482 WP_029725869.1 Na+/H+ antiporter subunit D -
  NST79_RS16505 (NST79_16505) - 3160272..3160748 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  NST79_RS16510 (NST79_16510) - 3160748..3161032 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NST79_RS16515 (NST79_16515) mnhG 3161016..3161390 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  NST79_RS16520 (NST79_16520) - 3161431..3161811 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  NST79_RS16525 (NST79_16525) comA 3161830..3162474 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NST79_RS16530 (NST79_16530) comP 3162555..3164867 (-) 2313 WP_198878535.1 histidine kinase Regulator
  NST79_RS16535 (NST79_16535) comX 3164883..3165104 (-) 222 WP_014480704.1 competence pheromone ComX -
  NST79_RS16540 (NST79_16540) - 3165106..3165969 (-) 864 WP_043858576.1 polyprenyl synthetase family protein -
  NST79_RS16545 (NST79_16545) degQ 3166154..3166294 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NST79_RS16550 (NST79_16550) - 3166515..3166640 (+) 126 WP_003228793.1 hypothetical protein -
  NST79_RS16555 (NST79_16555) - 3166754..3167122 (+) 369 WP_014477834.1 hypothetical protein -
  NST79_RS16560 (NST79_16560) pdeH 3167098..3168327 (-) 1230 WP_212059044.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89598.82 Da        Isoelectric Point: 8.3021

>NTDB_id=964012 NST79_RS16530 WP_198878535.1 3162555..3164867(-) (comP) [Bacillus sp. PS196]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFLEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=964012 NST79_RS16530 WP_198878535.1 3162555..3164867(-) (comP) [Bacillus sp. PS196]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACTAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATATTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGCGGGGCAAGAAGAGGTGAAGAGATAAGCACTTACCTGCTTGTTCTTACTTTAGTCAGCTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTGGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATAAAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTCGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGAT
GGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.437

99.87

0.564