Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NST79_RS12870 | Genome accession | NZ_CP150159 |
| Coordinates | 2481591..2482628 (-) | Length | 345 a.a. |
| NCBI ID | WP_212058897.1 | Uniprot ID | - |
| Organism | Bacillus sp. PS196 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2476591..2487628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST79_RS12820 (NST79_12820) | tasA | 2476688..2477473 (-) | 786 | WP_212058891.1 | TasA family protein | - |
| NST79_RS12825 (NST79_12825) | - | 2477537..2478109 (-) | 573 | WP_192858455.1 | signal peptidase I | - |
| NST79_RS12830 (NST79_12830) | tapA | 2478093..2478854 (-) | 762 | WP_212058893.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST79_RS12835 (NST79_12835) | - | 2479126..2479452 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NST79_RS12840 (NST79_12840) | - | 2479494..2479673 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| NST79_RS12845 (NST79_12845) | comGG | 2479745..2480119 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| NST79_RS12850 (NST79_12850) | comGF | 2480120..2480503 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| NST79_RS12855 (NST79_12855) | comGE | 2480529..2480876 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| NST79_RS12860 (NST79_12860) | comGD | 2480860..2481291 (-) | 432 | WP_212058895.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NST79_RS12865 (NST79_12865) | comGC | 2481281..2481577 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NST79_RS12870 (NST79_12870) | comGB | 2481591..2482628 (-) | 1038 | WP_212058897.1 | comG operon protein ComGB | Machinery gene |
| NST79_RS12875 (NST79_12875) | comGA | 2482615..2483685 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NST79_RS12880 (NST79_12880) | - | 2483897..2484094 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| NST79_RS12885 (NST79_12885) | corA | 2484096..2485049 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| NST79_RS12890 (NST79_12890) | - | 2485192..2486520 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| NST79_RS12895 (NST79_12895) | rsbRD | 2486573..2487409 (-) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39694.16 Da Isoelectric Point: 9.6257
>NTDB_id=963996 NST79_RS12870 WP_212058897.1 2481591..2482628(-) (comGB) [Bacillus sp. PS196]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSINMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GIVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSINMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GIVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=963996 NST79_RS12870 WP_212058897.1 2481591..2482628(-) (comGB) [Bacillus sp. PS196]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATCAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGAATTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATCAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGAATTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |