Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   ACJEHN_RS00715 Genome accession   NZ_CP174234
Coordinates   166397..168475 (-) Length   692 a.a.
NCBI ID   WP_010945900.1    Uniprot ID   Q5ZZ72
Organism   Legionella pneumophila strain SPF600     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 161397..173475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEHN_RS00700 (ACJEHN_00700) pyk 162714..164138 (-) 1425 WP_010945897.1 pyruvate kinase -
  ACJEHN_RS00705 (ACJEHN_00705) - 164122..165312 (-) 1191 WP_010945898.1 phosphoglycerate kinase -
  ACJEHN_RS00710 (ACJEHN_00710) gap 165323..166315 (-) 993 WP_015444943.1 type I glyceraldehyde-3-phosphate dehydrogenase -
  ACJEHN_RS00715 (ACJEHN_00715) recP/tkt 166397..168475 (-) 2079 WP_010945900.1 transketolase Machinery gene
  ACJEHN_RS00720 (ACJEHN_00720) - 168661..169995 (+) 1335 WP_010945901.1 hypothetical protein -
  ACJEHN_RS00725 (ACJEHN_00725) - 170094..172109 (+) 2016 WP_015444939.1 M3 family metallopeptidase -

Sequence

Protein


Download         Length: 692 a.a.        Molecular weight: 75932.88 Da        Isoelectric Point: 6.1367

>NTDB_id=963772 ACJEHN_RS00715 WP_010945900.1 166397..168475(-) (recP/tkt) [Legionella pneumophila strain SPF600]
MNGLLADLCLLSDNSASVKCKRVGMNSFTELANAVRMLSIDAVNQAQSGHPGMPLGMADIATVLWKKFLKFNPKNPHWFN
RDRFVLSNGHGSMLLYSLLHLTGYNLDISELKNFRQLHSKTPGHPEHGHTPGVETTTGPLGQGLANSVGMALAERVLAST
FNHDHFNLVDHYTYTFAGDGCLMEGISHEACSLAGTLGLGKLIVFYDDNGISIDGKVESWFTDDTTSRFKAYNWQVIGPI
DGHDADQIEQAISAARENTTQPSLIICKTVIGLGSSVAGSEKAHGSPLSAQDINNVREFFNWKHAPFEIPDSIYKQWDHR
EQGEKEEQQWLQLLHEYRQQHPSEHDEFLRRANGDLPDDWQEISAGFLKQCLNNEKAIATRKASQQCIEFFAPILPEMFG
GSADLTGSNNTDWSGSKAITAHNFSGNYLYYGVREFAMAAIMNGLAVHGGFIPYGGTFLVFADYARNAIRLSALMKQRVI
YVLTHDSIGLGEDGPTHQPIEHIAMLRMTPGMTVWRPADLMETAVAWQQSLEHHNGPSALLLSRQNLPALAHGTDAADLI
KKGGYIIADCEGKPDAILIATGSEVQLAITAAEKAKARGLQVRVVSMPCAERFLAQSDDYKNQVLPGQVRTRIAIEAASS
AYWHQFVGFDGAVIGLDCFGVSAPATDAFNYLGITVEKIINTLDTLTKQTMV

Nucleotide


Download         Length: 2079 bp        

>NTDB_id=963772 ACJEHN_RS00715 WP_010945900.1 166397..168475(-) (recP/tkt) [Legionella pneumophila strain SPF600]
ATGAATGGTCTTCTTGCCGATTTATGCCTTCTGAGCGACAATAGTGCCTCAGTTAAATGCAAAAGAGTAGGCATGAACAG
TTTTACAGAATTAGCTAATGCAGTACGCATGTTAAGCATCGATGCAGTAAACCAAGCTCAATCAGGCCACCCTGGCATGC
CCTTGGGTATGGCTGATATTGCCACCGTTTTATGGAAAAAATTTCTAAAATTCAACCCCAAAAACCCGCACTGGTTTAAC
AGAGACCGTTTTGTATTATCTAATGGCCATGGTTCCATGCTTCTCTATTCTTTACTGCATTTGACCGGATACAACTTGGA
TATTAGCGAGCTTAAAAACTTCCGCCAATTGCACTCAAAAACACCAGGGCATCCGGAACATGGGCACACTCCTGGTGTCG
AAACAACAACAGGGCCATTAGGTCAGGGTTTAGCCAATTCAGTCGGGATGGCCTTAGCGGAGCGTGTGCTGGCTAGTACC
TTTAACCACGATCACTTTAACCTGGTTGATCATTATACATATACTTTTGCCGGTGATGGTTGCCTGATGGAAGGCATTTC
TCATGAGGCGTGTTCTTTAGCTGGCACTCTTGGTTTGGGAAAGCTCATTGTATTTTATGACGACAATGGGATATCTATTG
ATGGTAAGGTAGAATCCTGGTTTACGGACGATACTACGTCTCGCTTTAAAGCCTACAACTGGCAAGTCATAGGCCCCATC
GATGGCCACGACGCAGATCAAATTGAGCAAGCCATATCAGCAGCACGCGAGAACACGACTCAACCTTCATTAATTATCTG
TAAAACCGTCATAGGACTGGGCTCCTCTGTAGCCGGTAGCGAAAAAGCGCACGGCTCTCCATTGAGTGCCCAAGACATAA
ATAATGTCCGTGAATTTTTTAATTGGAAACATGCTCCCTTTGAAATTCCAGATTCGATATACAAGCAATGGGATCATAGA
GAGCAAGGAGAAAAAGAAGAGCAACAATGGCTGCAGCTCCTGCATGAATACCGGCAACAACATCCATCGGAACACGATGA
GTTTTTGCGTCGTGCCAATGGCGACCTGCCCGATGATTGGCAAGAAATATCGGCTGGATTCCTAAAACAATGCCTGAACA
ATGAGAAAGCCATAGCAACGCGTAAGGCGTCGCAGCAATGCATAGAGTTTTTCGCGCCAATATTACCGGAAATGTTTGGC
GGCTCAGCGGATTTGACTGGTTCCAATAATACCGACTGGTCAGGCAGCAAAGCCATCACGGCCCATAATTTTTCCGGAAA
TTACCTTTATTATGGAGTGAGGGAATTTGCCATGGCAGCCATCATGAATGGACTTGCTGTGCATGGGGGATTCATTCCCT
ACGGCGGAACATTCCTTGTTTTCGCAGATTATGCAAGAAATGCCATCCGTTTAAGCGCTTTAATGAAACAAAGAGTGATA
TACGTATTGACTCATGATTCTATCGGTTTAGGGGAAGATGGCCCGACACACCAACCTATAGAACATATCGCTATGTTAAG
AATGACCCCTGGCATGACGGTCTGGCGCCCTGCTGATTTGATGGAAACCGCTGTTGCATGGCAACAATCGTTAGAACATC
ATAATGGCCCGTCTGCCTTATTACTCTCAAGACAAAATCTGCCCGCTTTAGCCCATGGCACCGATGCGGCTGACTTGATT
AAGAAAGGCGGATATATTATTGCCGATTGTGAAGGGAAACCTGATGCTATCCTGATAGCCACTGGTTCAGAAGTTCAACT
GGCTATAACCGCAGCAGAAAAGGCAAAAGCAAGAGGTCTCCAGGTCAGGGTGGTATCCATGCCCTGTGCTGAGCGATTCC
TTGCCCAGAGTGATGATTACAAAAACCAGGTATTACCTGGTCAGGTTCGCACACGTATTGCGATAGAAGCAGCTAGCAGT
GCCTATTGGCACCAATTTGTTGGCTTTGACGGCGCTGTCATTGGGCTGGATTGTTTTGGGGTATCAGCTCCTGCTACAGA
TGCTTTTAATTACCTTGGAATTACAGTAGAAAAAATTATCAATACTCTAGATACATTAACCAAACAAACAATGGTGTAA

Domains

Predicted by InterProScan.

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(30-357)

Transketolase, C-terminal domain (Transketolase_C)

(566-679)

Transketolase, pyrimidine binding domain (Transket_pyr)

(377-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZZ72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

46.657

95.087

0.444