Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NSQ16_RS16450 Genome accession   NZ_CP150155
Coordinates   3151043..3153343 (-) Length   766 a.a.
NCBI ID   WP_088300729.1    Uniprot ID   -
Organism   Bacillus sp. PS108     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3146043..3158343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ16_RS16410 (NSQ16_16410) - 3146508..3146939 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NSQ16_RS16415 (NSQ16_16415) - 3146939..3147280 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NSQ16_RS16420 (NSQ16_16420) - 3147273..3148754 (+) 1482 WP_029725869.1 Na+/H+ antiporter subunit D -
  NSQ16_RS16425 (NSQ16_16425) - 3148760..3149236 (+) 477 WP_339232324.1 Na+/H+ antiporter subunit E -
  NSQ16_RS16430 (NSQ16_16430) - 3149236..3149520 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NSQ16_RS16435 (NSQ16_16435) mnhG 3149504..3149878 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  NSQ16_RS16440 (NSQ16_16440) - 3149919..3150299 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  NSQ16_RS16445 (NSQ16_16445) comA 3150318..3150962 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NSQ16_RS16450 (NSQ16_16450) comP 3151043..3153343 (-) 2301 WP_088300729.1 histidine kinase Regulator
  NSQ16_RS16455 (NSQ16_16455) comX 3153355..3153519 (-) 165 WP_015384519.1 competence pheromone ComX -
  NSQ16_RS16460 (NSQ16_16460) - 3153532..3154392 (-) 861 WP_128422373.1 polyprenyl synthetase family protein -
  NSQ16_RS16465 (NSQ16_16465) degQ 3154577..3154717 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NSQ16_RS16470 (NSQ16_16470) - 3154939..3155064 (+) 126 WP_144500545.1 hypothetical protein -
  NSQ16_RS16475 (NSQ16_16475) - 3155178..3155546 (+) 369 WP_144500544.1 hypothetical protein -
  NSQ16_RS16480 (NSQ16_16480) pdeH 3155522..3156751 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88544.65 Da        Isoelectric Point: 7.6650

>NTDB_id=963686 NSQ16_RS16450 WP_088300729.1 3151043..3153343(-) (comP) [Bacillus sp. PS108]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYEKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=963686 NSQ16_RS16450 WP_088300729.1 3151043..3153343(-) (comP) [Bacillus sp. PS108]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCTGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTGGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGAGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCTAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTG
GTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATACCGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.653

100

0.59