Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | OO986_RS03145 | Genome accession | NZ_AP026552 |
| Coordinates | 652158..652775 (-) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
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Genomic Context
Location: 647158..657775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO986_RS03135 (VV208B2_05510) | aceF | 648435..650339 (+) | 1905 | WP_264922381.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| OO986_RS03140 (VV208B2_05520) | lpdA | 650597..652024 (+) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| OO986_RS03145 (VV208B2_05530) | opaR | 652158..652775 (-) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| OO986_RS03150 (VV208B2_05540) | hpt | 653167..653697 (+) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| OO986_RS03155 (VV208B2_05550) | can | 653792..654460 (-) | 669 | WP_013571146.1 | carbonate dehydratase | - |
| OO986_RS03160 (VV208B2_05560) | - | 654702..656372 (+) | 1671 | WP_039554598.1 | SulP family inorganic anion transporter | - |
| OO986_RS03165 (VV208B2_05570) | - | 656539..657462 (+) | 924 | WP_039554596.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=96368 OO986_RS03145 WP_011079558.1 652158..652775(-) (opaR) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=96368 OO986_RS03145 WP_011079558.1 652158..652775(-) (opaR) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGTGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATTACCAACGCAATGATTGAGCTGGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGTTGTTTGTTCAGGCAAACCGTACCAACAATACCGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGTGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATTACCAACGCAATGATTGAGCTGGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGTTGTTTGTTCAGGCAAACCGTACCAACAATACCGCAGAGCTGAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |