Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSQ16_RS05985 Genome accession   NZ_CP150155
Coordinates   1162902..1163093 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. PS108     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1157902..1168093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ16_RS05955 (NSQ16_05955) argF 1158767..1159726 (+) 960 WP_327837727.1 ornithine carbamoyltransferase -
  NSQ16_RS05960 (NSQ16_05960) - 1159812..1159991 (+) 180 WP_003245356.1 YjzC family protein -
  NSQ16_RS05965 (NSQ16_05965) - 1160037..1160222 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NSQ16_RS05970 (NSQ16_05970) - 1160471..1161205 (+) 735 WP_033883595.1 hypothetical protein -
  NSQ16_RS05975 (NSQ16_05975) - 1161287..1161844 (+) 558 WP_014479435.1 hypothetical protein -
  NSQ16_RS05980 (NSQ16_05980) med 1161934..1162887 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NSQ16_RS05985 (NSQ16_05985) comZ 1162902..1163093 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NSQ16_RS05990 (NSQ16_05990) yjzB 1163123..1163362 (-) 240 WP_003232972.1 spore coat protein YjzB -
  NSQ16_RS05995 (NSQ16_05995) fabH 1163527..1164465 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NSQ16_RS06000 (NSQ16_06000) fabF 1164488..1165729 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NSQ16_RS06005 (NSQ16_06005) - 1165805..1166590 (+) 786 WP_032725393.1 DUF2268 domain-containing protein -
  NSQ16_RS06010 (NSQ16_06010) appD 1166782..1167768 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=963644 NSQ16_RS05985 WP_003224559.1 1162902..1163093(+) (comZ) [Bacillus sp. PS108]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=963644 NSQ16_RS05985 WP_003224559.1 1162902..1163093(+) (comZ) [Bacillus sp. PS108]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1